Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 168 a.a., ECF family sigma factor from Agrobacterium fabrum C58

 Score =  112 bits (281), Expect = 2e-30
 Identities = 64/150 (42%), Positives = 86/150 (57%)

Query: 3   FEDELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRN 62
           F DE+   +P LRR+A+AL      ADDL+Q  +ERA+ K+  W P   L  W+YR++ N
Sbjct: 4   FLDEMTSCIPALRRYANALTHDRDTADDLVQDCLERAIRKKALWRPQGPLRPWLYRVLVN 63

Query: 63  LWIDTIRAETRRCETFVAPQTGEIVGADGGQEMTVELGNVARAMRALPPEQREAVALVVI 122
           ++ + +R   RR +        E +     Q   V L  +ARA+  L  E RE + LVV+
Sbjct: 64  VYRNNLRGSKRRPQQIPIDDVTEQLVVPAAQTGRVALAEMARAIEKLSGEHRETLLLVVV 123

Query: 123 EGFAYKEAAAILEIPMGTLTSRLVRGREAL 152
           EG  Y EAA ILEIP+GTL SRL R R AL
Sbjct: 124 EGLTYAEAANILEIPLGTLMSRLGRARTAL 153