Pairwise Alignments

Query, 409 a.a., ABC-type Na+ efflux pump, permease component from Sphingomonas koreensis DSMZ 15582

Subject, 452 a.a., ABC transporter permease from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  103 bits (257), Expect = 1e-26
 Identities = 120/446 (26%), Positives = 187/446 (41%), Gaps = 71/446 (15%)

Query: 8   IRQTLTIARRDFVATVFTPTFLLFLFA-PLMMVGFGAIGGVGAASISKSGDDKARIVLLA 66
           + +TL IARR++VA   T  F L L A PL    F  +GG G  ++ K+ +    + ++ 
Sbjct: 1   MNRTLLIARREYVAYAKTVGFWLSLLAFPL----FAVLGG-GIPALIKASEPIKSVAVIE 55

Query: 67  GGDQARSAIAA---------DRQLRAMFRSLEQ--------------PPRLIVETPGPNP 103
            G  A    AA         DRQ   +  + E+              P   +V+ P    
Sbjct: 56  EGPNATGLAAAVRASLQADVDRQNNRLREAAEKGQAGAGRAVASITGPKIRLVDAPPAIA 115

Query: 104 EAQGRAMFE--RKESDTYAVMYGPLDKPQILHSVNGGRSAAYLAALADQ---------VL 152
           +A G A  E  RK  D        LD    L   +G  +A    A A            L
Sbjct: 116 DAVGPARDEAIRKALDKQTSKARRLDAVVFLSRTDGKPAAQVWTARATDNDVSGFVRNAL 175

Query: 153 RAQR-------AGTAAPLSEATKIIVTR-----PGASAGGQGQA-----AFFATTALFMI 195
           R  R       AG A  +++  +          P A++GG+        +F      F++
Sbjct: 176 RDARRTELLTAAGVAPAVAQEVQTFRPEVKSFSPSAASGGEVSMRDRIPSFIGLGVGFLL 235

Query: 196 -SLLLAGQ--VVGTMAEERSNKVIEVLAAAVPLESVFFGKLVGMFGVALLFLGFWGTVVV 252
            SL++ G   ++ ++ EE+SNK++EVL ++     +  GK++G+  + L  +G WG    
Sbjct: 236 WSLVITGASILLNSVMEEKSNKILEVLLSSASATEILTGKVLGVALLTLTVMGVWG---- 291

Query: 253 NVGSLLPVKLATAFIDVGPAVGLPMF--GLLFF--AYFVTSYMLLGAVFLGLGAQASTQR 308
            +G+     L +A  +    VG  +   GL+F+  AY V  Y++   +F  +GA   T R
Sbjct: 292 GIGAFT---LISASPETAATVGQVLLHDGLIFYFIAYMVGGYLMYAVLFAAIGAFCETPR 348

Query: 309 ELQMMSLPITIFQVAMWGLASATALSPDSGLATAAAAFPFSSPFAMVARAANAPDLWPHA 368
           + Q +  PI +  V    +      SPD+ +    +  PF +PF M ARA + P L    
Sbjct: 349 DAQTLMGPIMMILVVPILVMQMALTSPDAPVVKVLSWIPFFTPFLMSARAPSDPPLVEVV 408

Query: 369 LALGWQILWVAITVTIAARLFRRGVL 394
           L L       A  V IA R FR G L
Sbjct: 409 LTLIGMFATAAFMVWIAGRAFRAGAL 434