Pairwise Alignments

Query, 246 a.a., undecaprenyl diphosphate synthase from Sphingomonas koreensis DSMZ 15582

Subject, 251 a.a., Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) from Pseudomonas putida KT2440

 Score =  227 bits (578), Expect = 2e-64
 Identities = 126/236 (53%), Positives = 148/236 (62%), Gaps = 2/236 (0%)

Query: 9   PASPEGGAVPRHVAIIMDGNGRWAKARRLPRIAGHKQGVDAVRRVSRAARELGIEVLTLY 68
           PA+P   +VPRHVAIIMDGN RWAK R LP +AGHK GVDAVR V     + G+EVLTL+
Sbjct: 6   PAAPS--SVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLF 63

Query: 69  AFSSENWRRPEEEVRDLMGLLRHFLKNELRDLVAENVRLRVIGDYHALSDDLVAMIDGAI 128
           AFSSENW+RP EEV  LM L    L+ E + L   N+ LR+IGD      +L A +  A 
Sbjct: 64  AFSSENWQRPAEEVGALMELFFSALRREAKRLDENNISLRIIGDRSRFHPELQAAMREAE 123

Query: 129 ERTSVNTGATLVIALNYGAQAEIVAAARRLAAAAKAGELDPAAIDDTMFGDALTTHGLPP 188
             T+ N    L IA NYG Q +I  AA+RLA   +AG L P  I   +    L T  LP 
Sbjct: 124 AVTAGNNRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPL 183

Query: 189 LDLLIRTSGEQRLSNFLLWQAAYAELLFVDTLWPDFDGAALADAIAQFGKRQRRFG 244
            DL IRT GE R+SNFLLWQ AYAEL F D  WPDF   A+ +A+A F  RQRRFG
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFG 239