Pairwise Alignments

Query, 304 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 231 a.a., GntR family transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 12/195 (6%)

Query: 103 QLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIHSEK-RGQWSMKQFDQSYAEQLF 161
           +L PG    E  LAR   VS   +R  LL   +  LI  E  RG +  K  D++ A ++F
Sbjct: 26  RLPPGTKLREEALARVYHVSRTKIRAALLMLAKDKLIRMEPDRGAFVAKP-DETEAREVF 84

Query: 162 ELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLL 221
            +R +LE   ++ F+            K + E H++      +     ++L  DFH L+ 
Sbjct: 85  AVRRVLEVALVREFIAKATPADYKRLEKHLAEEHKVAASGDLSDVPRRNRLMADFHLLMA 144

Query: 222 SAADNIFFDQSLEIISV---IFHFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDAT 278
               N    + L  +S    +    YQ     ++     + +EH  +L A   R D+D  
Sbjct: 145 DVVGNSVLKEMLYELSARSSVITMMYQSTYDAVR-----SSEEHTALLDA-AKRGDVDGA 198

Query: 279 LAL-RNHLNSAKQSM 292
           +AL   H+   + S+
Sbjct: 199 IALMEEHMAHTEASL 213



 Score = 29.6 bits (65), Expect = 7e-05
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 15 VIDDMARGHIPSPLPS-----QSALAEMYNISRTTVRHILSHLRECGVLTQVGNDYVIAR 69
          + DD+A+  +   LP      + ALA +Y++SRT +R  L  L +  ++    +      
Sbjct: 14 IADDIAQAIVAHRLPPGTKLREEALARVYHVSRTKIRAALLMLAKDKLIRMEPDRGAFVA 73

Query: 70 KPDHDD 75
          KPD  +
Sbjct: 74 KPDETE 79