Pairwise Alignments

Query, 804 a.a., DNA gyrase subunit B (NCBI) from Escherichia coli BW25113

Subject, 805 a.a., DNA topoisomerase (ATP-hydrolyzing) (RefSeq) from Shewanella amazonensis SB2B

 Score = 1188 bits (3073), Expect = 0.0
 Identities = 583/803 (72%), Positives = 681/803 (84%), Gaps = 2/803 (0%)

Query: 3   NSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVT 62
           N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAGHC EI +T
Sbjct: 4   NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSEITIT 63

Query: 63  IHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 122
           IH D SVSV+DDGRGIP  IHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV
Sbjct: 64  IHVDGSVSVKDDGRGIPVAIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 123

Query: 123 VNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEF 182
           VNALS+KL+L I+R+GK+H Q Y HGVP AP+ V G+  KTGT VRFWPS ETF++ T F
Sbjct: 124 VNALSKKLQLTIRRDGKVHEQFYTHGVPDAPIKVVGDATKTGTEVRFWPSEETFSD-TLF 182

Query: 183 EYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFY 242
            ++ILAKR+RELSFLNSGV IRL D+RD K++ F YEGGI AFVEYLN+NKTP++ +IF+
Sbjct: 183 HFDILAKRVRELSFLNSGVGIRLVDERDNKDEFFKYEGGISAFVEYLNRNKTPVNKDIFH 242

Query: 243 FSTEK-DGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEG 301
           F+ E+ DGI VEVA+QWNDGFQENIYCFTNNIPQRDGGTHLAGFR A+TR LN YM+ EG
Sbjct: 243 FAQEREDGITVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRNLNNYMEAEG 302

Query: 302 YSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYL 361
           Y+KK K +ATGDDAREGL AV+SVKVPDPKFSSQTKDKLVSSEVKSAVEQ M E L +YL
Sbjct: 303 YNKKNKTNATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKSAVEQTMGEKLGDYL 362

Query: 362 LENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSELY 421
           LENP DAK++VGKIIDAARAREAAR+AREMTRRKGALDL GLPGKLADCQE+DP LSE+Y
Sbjct: 363 LENPGDAKLIVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPGLSEIY 422

Query: 422 LVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRD 481
           +VEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRD
Sbjct: 423 IVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRD 482

Query: 482 EYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGK 541
           EY+PDK RYH IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG+VYIAQPPLYKVKKGK
Sbjct: 483 EYDPDKTRYHYIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLYKVKKGK 542

Query: 542 QEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERRY 601
            EQY+KDD A+ ++  + ALDGA++H +  AP ++GE LEKLV++Y   + +I R++ RY
Sbjct: 543 HEQYLKDDPALTEFLTTGALDGASIHPSQGAPGMSGEPLEKLVNQYREVEGIIARLDLRY 602

Query: 602 PKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFE 661
           P+ +   ++Y P L+   L+D+  V  W +A V++L ++E  G  +      + E+ ++ 
Sbjct: 603 PEVLTDRMLYHPVLSNDILADQAKVQAWCDAFVADLVERESSGVLYNAVAEHDPERQVYV 662

Query: 662 PIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQ 721
           P V +R HG+D +Y   ++F    +YR++  L   L GL+EE  +++RGE+ +PV SF +
Sbjct: 663 PKVTLRRHGIDHEYLFSYDFFQSSDYRKMGALANALDGLIEEGGYVQRGEKVKPVTSFIE 722

Query: 722 ALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLM 781
           ALDWLV ES+RGL IQRYKGLGEMNPEQLWETTMDPESRRML+VT++DAIAADQLFT LM
Sbjct: 723 ALDWLVGESKRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLQVTIEDAIAADQLFTCLM 782

Query: 782 GDAVEPRRAFIEENALKAANIDI 804
           GD VEPRR FIE NAL  AN+D+
Sbjct: 783 GDQVEPRRDFIEANALNVANLDV 805