Pairwise Alignments

Query, 804 a.a., DNA gyrase subunit B (NCBI) from Escherichia coli BW25113

Subject, 675 a.a., DNA gyrase (subunit B) GyrB (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) from Mycobacterium tuberculosis H37Rv

 Score =  551 bits (1420), Expect = e-161
 Identities = 288/568 (50%), Positives = 382/568 (67%), Gaps = 37/568 (6%)

Query: 3   NSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVT 62
           + Y ++SI +L+GL+AVRKRPGMYIG T +  GLHH+++EVVDNA+DEA+AG+   + V 
Sbjct: 10  DEYGAASITILEGLEAVRKRPGMYIGSTGE-RGLHHLIWEVVDNAVDEAMAGYATTVNVV 68

Query: 63  IHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 122
           +  D  V V DDGRGIP   H   G+   +V+MT LHAGGKFD ++Y +SGGLHGVGVSV
Sbjct: 69  LLEDGGVEVADDGRGIPVATHAS-GIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSV 127

Query: 123 VNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEF 182
           VNALS +LE+ I+R+G    Q+YE   P   L     T+KTG+ VRFW     F   TE+
Sbjct: 128 VNALSTRLEVEIKRDGYEWSQVYEKSEPLG-LKQGAPTKKTGSTVRFWADPAVF-ETTEY 185

Query: 183 EYEILAKRLRELSFLNSGVSIRLRDKRDGKED---------------------------- 214
           ++E +A+RL+E++FLN G++I L D+R  +++                            
Sbjct: 186 DFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHK 245

Query: 215 ----HFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFT 270
                FHY GG+  FV+++N+ K  IH +I  FS +  G  VE+A+QWN G+ E+++ F 
Sbjct: 246 VKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFA 305

Query: 271 NNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDP 330
           N I   +GGTH  GFR+A+T  +N Y       K    + TGDD REGL AV+SVKV +P
Sbjct: 306 NTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEP 365

Query: 331 KFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRARE 390
           +F  QTK KL ++EVKS V++  NE L  +   NPTDAK+VV K + +A+AR AAR+ARE
Sbjct: 366 QFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARE 425

Query: 391 MTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI 450
           + RRK A D+ GLPGKLADC+  DP  SELY+VEGDSAGGSAK GR+   QAILPL+GKI
Sbjct: 426 LVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKI 485

Query: 451 LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLL 510
           +NVEKAR D++L + EV  +ITALG GI  DE++  KLRYH I++M DADVDG HI TLL
Sbjct: 486 INVEKARIDRVLKNTEVQAIITALGTGI-HDEFDIGKLRYHKIVLMADADVDGQHISTLL 544

Query: 511 LTFFYRQMPEIVERGHVYIAQPPLYKVK 538
           LT  +R M  ++E GHV++AQPPLYK+K
Sbjct: 545 LTLLFRFMRPLIENGHVFLAQPPLYKLK 572



 Score = 82.4 bits (202), Expect = 8e-20
 Identities = 39/69 (56%), Positives = 52/69 (75%)

Query: 736 IQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEEN 795
           IQRYKGLGEM+ ++LWETTMDP  R + +VT+ DA AAD+LF+ LMG+ V+ RR+FI  N
Sbjct: 607 IQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRN 666

Query: 796 ALKAANIDI 804
           A     +D+
Sbjct: 667 AKDVRFLDV 675