Pairwise Alignments

Query, 804 a.a., DNA gyrase subunit B (NCBI) from Escherichia coli BW25113

Subject, 848 a.a., DNA gyrase, B subunit from Sphingomonas koreensis DSMZ 15582

 Score =  877 bits (2265), Expect = 0.0
 Identities = 475/841 (56%), Positives = 598/841 (71%), Gaps = 48/841 (5%)

Query: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61
           SNSY + SIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEV DNAIDEALAGHC  II+
Sbjct: 18  SNSYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEALAGHCDRIII 77

Query: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKF----DDNSYKVSGGLHG 117
            ++AD SVSV+D+GRGIPTGIH EEGVSAAEVIMT LHAGGKF    DDN+YKVSGGLHG
Sbjct: 78  QLNADGSVSVEDNGRGIPTGIHAEEGVSAAEVIMTQLHAGGKFENTSDDNAYKVSGGLHG 137

Query: 118 VGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETE-KTGTMVRFWPSLE-- 174
           VGVSVVNALS+ L+L I R+G+ H   + +G   APL V G +  K GT V F  S E  
Sbjct: 138 VGVSVVNALSEWLDLNIWRDGEEHYMRFAYGDATAPLKVIGPSNGKKGTRVTFLASTEKV 197

Query: 175 -----TFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKR--DGKEDHFHYEGGIKAFVE 227
                TF N  E+++E L  R REL+FLNSGV + LRD R  + KE    YEGGI AFV+
Sbjct: 198 PGDGGTFKNQIEYDFEKLEHRYRELAFLNSGVRLFLRDARHEEVKEVELFYEGGIAAFVK 257

Query: 228 YLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRA 287
           +L++NK+P+ P+    + ++D IG++VAL+WND + EN+ CFTNNIPQRDGGTHLA FRA
Sbjct: 258 WLDRNKSPLFPDPISVNGQRDDIGIDVALEWNDSYYENVLCFTNNIPQRDGGTHLAAFRA 317

Query: 288 AMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKS 347
           A+TRT+N+Y DK G  KK KV+ TGDD REGL A+VSVK+PDPKFSSQTKDKLVSSEV+ 
Sbjct: 318 ALTRTINSYADKSGLLKKEKVTLTGDDMREGLTAIVSVKLPDPKFSSQTKDKLVSSEVRQ 377

Query: 348 AVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKL 407
            +E  M + ++++L ENP  A+ ++ K+IDAA AREAA++ARE+TRRKG +D+A LPGKL
Sbjct: 378 PLEALMADKMSDWLEENPALARAIIQKVIDAAAAREAAKKARELTRRKGVMDIASLPGKL 437

Query: 408 ADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEV 467
           ADCQERDPA SEL+LVEGDSAGGSAKQGR+R  QAILPL+GKILNVE+ARFD+MLSS+E+
Sbjct: 438 ADCQERDPAKSELFLVEGDSAGGSAKQGRDRHFQAILPLRGKILNVERARFDRMLSSKEI 497

Query: 468 ATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHV 527
            TLI A+G GIGRD++N +KLRYH I+IMTDADVDG+HIRTLLLTFFYRQMPEI+E GH+
Sbjct: 498 GTLIQAMGTGIGRDDFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPEIIENGHL 557

Query: 528 YIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEY 587
           +IAQPPLYK  KG+ E Y+KDD A+D Y +   + G  L T  S   + G+ L +LV   
Sbjct: 558 FIAQPPLYKASKGRSEVYLKDDAALDDYLVEAGVGGNRLET--SEGTILGQDLARLVEHA 615

Query: 588 NATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQW 647
              + ++  + RRY  A+++ L     L + + + EQ   R   A V++  D     ++W
Sbjct: 616 RRMKTLMRYVPRRYDPAIIEALALGSAL-DPEATREQRGERL--AAVTKRLDLTDEDARW 672

Query: 648 KFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLG----------EKL 697
              V  +   + FE + R    GV   + ++  F+T  E R++  L            KL
Sbjct: 673 SARVTEDGGFH-FERLWR----GVTDHHIVEAAFLTSAEGRKLHALAAEQAESYAAVSKL 727

Query: 698 RGLLEEDAFIE-----RGERRQPVASFE---------QALDWLVKESRRGLSIQRYKGLG 743
             +    A  E      GE  +PV + +         + L+ ++   R+GLSIQRYKGLG
Sbjct: 728 VSVKSAQAEAEAAPAVEGEDEEPVVAAKGETLVSRPSELLNAILASGRKGLSIQRYKGLG 787

Query: 744 EMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANID 803
           EMN EQLWETT+DP++R ML V +  A  AD++FT LMGD VEPRR FI+ENAL  AN+D
Sbjct: 788 EMNAEQLWETTLDPQNRSMLVVAIDQADVADEIFTRLMGDVVEPRREFIQENALSVANLD 847

Query: 804 I 804
           +
Sbjct: 848 V 848