Pairwise Alignments

Query, 804 a.a., DNA gyrase subunit B (NCBI) from Escherichia coli BW25113

Subject, 798 a.a., DNA gyrase, B subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  706 bits (1821), Expect = 0.0
 Identities = 390/813 (47%), Positives = 523/813 (64%), Gaps = 32/813 (3%)

Query: 3   NSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVT 62
           N+Y + SI +L+GL AVRKRP MYIG TD   GLHH+V+EVVDN+IDEA+AG C +++V 
Sbjct: 7   NNYTADSITILEGLSAVRKRPAMYIGSTD-ARGLHHLVYEVVDNSIDEAMAGFCSKVVVK 65

Query: 63  IHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 122
           +H DNSV+V D+GRGIP  +HP+EG  A EV+MT LHAGGKFD+N+YKVSGGLHGVGVS 
Sbjct: 66  LHLDNSVTVSDNGRGIPVDMHPKEGRPAVEVVMTKLHAGGKFDNNAYKVSGGLHGVGVSC 125

Query: 123 VNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEF 182
           VNALS+ LE+ ++R+G+ + Q Y  GVPQ  L V G +E  GT VRF P  E F    +F
Sbjct: 126 VNALSEWLEVRVKRDGQRYGQRYARGVPQEDLRVLGASEGHGTTVRFKPDEEIF-ETNQF 184

Query: 183 EYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFY 242
            YE L KR  ELS+LN G+ I   D+R G+   F  EGGI+ FV+ LN  +T IHP I  
Sbjct: 185 SYETLRKRFEELSYLNRGLEIEFIDERSGESHTFFAEGGIRQFVKDLNSGETGIHP-IVA 243

Query: 243 FSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEG- 301
              + DG+ V+ ALQ+N G++EN+  F NNI  ++GGTHLAGF+ A+TR +N Y+  +  
Sbjct: 244 GEGKTDGVVVDFALQYNAGYKENVLTFANNIRTKEGGTHLAGFKTALTRAINGYVKGQAD 303

Query: 302 YSKKAKVSA-TGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY 360
            +KK K +A +GDD REGL AVVSVK+P P+F  QTK KL +SE+   V   + + L  +
Sbjct: 304 LTKKMKGTALSGDDVREGLTAVVSVKLPQPQFEGQTKTKLGNSEIAGIVAGIVYDRLNVH 363

Query: 361 LLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL 420
             ENP D ++++ K +DAARAR+AARRA+E+ RRKGAL    LPGKLADCQ +DPALSEL
Sbjct: 364 FEENPKDVRLIIDKAVDAARARDAARRAKELVRRKGALSDNALPGKLADCQSKDPALSEL 423

Query: 421 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR 480
           ++VEGDSAGGSAKQGR+   QAILPL+GKILN E+ RFDKML+++EV  LITA+G GIG 
Sbjct: 424 FIVEGDSAGGSAKQGRDPSTQAILPLRGKILNTERTRFDKMLANKEVKALITAMGAGIGE 483

Query: 481 DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG 540
           D+ + DKLRYH I+IMTDADVDG+HIRTLLLTFF+RQ  +++E G++YIAQPPLY+    
Sbjct: 484 DDTDYDKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQYQKLIESGYLYIAQPPLYRAHNS 543

Query: 541 KQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERR 600
           + E++IKDD  ++ + ++   +   + T     +  G  + +L+         I  +E  
Sbjct: 544 RMERFIKDDAELNNFLLTRVSEDVEVRTPGGC-SFKGTDIVRLMRSIETVAARIRDVETA 602

Query: 601 --YPKAMLKELIYQPTLTEA--DLSDEQTVTRWV----NALVSELNDKEQHGSQWKFDVH 652
               +  L  L Y   +T    +  D   +  W+     ++ +EL   ++    +    +
Sbjct: 603 GISRELFLGFLEYGERITPEWFEQHDGNGLRPWLAGRGYSMTAELESGDEGDRTFVVFEN 662

Query: 653 TNAEQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAF-IERGE 711
           TN  +                   +  EF     YR      E +R      +F ++R  
Sbjct: 663 TNGHRT-----------------RIGAEFFGSRMYRSSWDALEAIRSECGGLSFTLDRKG 705

Query: 712 RRQPVASFEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAI 771
                         + +E+RRGL+IQRYKGLGEMNPEQLW TTM+PE+R +L+V+++DA 
Sbjct: 706 ETVGEGDMFDLQRMVFEEARRGLNIQRYKGLGEMNPEQLWVTTMNPENRTLLQVSIEDAE 765

Query: 772 AADQLFTTLMGDAVEPRRAFIEENALKAANIDI 804
            A   F  LMGD VEPRR FI  NAL    +DI
Sbjct: 766 EASDAFEQLMGDRVEPRREFIVRNALAVQELDI 798