Pairwise Alignments

Query, 229 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 233 a.a., GntR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 16/229 (6%)

Query: 6   TDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEMKRYRG 65
           +D +   L + I  G +  GS LP EA L ++F  SR ++RE    L  + ++E ++  G
Sbjct: 11  SDTVARQLLENIDAGAFPRGSKLPTEAVLAQQFGVSRTVVREAIARLKHEGVVEPRQGSG 70

Query: 66  AFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVRNLVEPAIARWAAERATSSDLAQI 125
            FV  +     L  D  +        P  +  + E+R  +E  +A  AA+R ++ DL  I
Sbjct: 71  VFVTEQAGIKPLRIDYTE-----VSSPEAVLQIVELRRAIEAEVAAQAAKRRSAEDLQAI 125

Query: 126 ESALNEM---IANNQDREAFNEADIRYHEAVLQSVHNPVLQQLSIAISSLQRAVFERTWM 182
           E+AL ++   +A   D  A   AD+ +H A+ Q+  NP   +    +S    A    T  
Sbjct: 126 EAALAQIGVDVAAGGDGVA---ADVAFHRALAQATRNPYFIKTLEFLSQYLEAATAVT-R 181

Query: 183 GDEANMP----QTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKE 227
           G+EA       Q  +EH+A+ +AIR  D  AA  AA T + ++ RRL +
Sbjct: 182 GNEARYEDFSRQVREEHEAIVEAIRAGDEMAARNAAQTHMFNAARRLSQ 230