Pairwise Alignments

Query, 219 a.a., predicted outer membrane lipoprotien (NCBI) from Escherichia coli BW25113

Subject, 222 a.a., OmpA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  251 bits (641), Expect = 8e-72
 Identities = 125/219 (57%), Positives = 163/219 (74%), Gaps = 1/219 (0%)

Query: 2   KKRVYLIAAVVSGALAVSGCTT-NPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
           KK +  +  V + A   +GC+T NPYT E++   +  GA +G++ GA +G  SSSK DRG
Sbjct: 3   KKAILTLTGVFALAAMGTGCSTVNPYTNEQQTANATTGAIIGAVAGAAVGVASSSKSDRG 62

Query: 61  KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
           KGALIGAA+GAA+GGG+GYYMDVQE KLR +++ +GVSVTR+GDNIILNMPN+VTF    
Sbjct: 63  KGALIGAASGAAVGGGIGYYMDVQETKLRQQLQASGVSVTRNGDNIILNMPNDVTFAVDK 122

Query: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
             L P     L  VA+V KEY KT +NV+GYTDS+G    N+RLSQ RA  V + L+++G
Sbjct: 123 TDLSPRAMQVLDSVALVAKEYSKTRLNVLGYTDSSGADSYNLRLSQVRASEVGNYLLSKG 182

Query: 181 VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL 219
           V A+R+ TQG+G A+PIASN+TAEG+AQNRRVEI L+P+
Sbjct: 183 VAAARVSTQGMGEASPIASNATAEGRAQNRRVEIILTPI 221