Pairwise Alignments

Query, 219 a.a., predicted outer membrane lipoprotien (NCBI) from Escherichia coli BW25113

Subject, 208 a.a., OmpA/MotB domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  140 bits (352), Expect = 2e-38
 Identities = 82/218 (37%), Positives = 121/218 (55%), Gaps = 11/218 (5%)

Query: 1   MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG 60
           M+  V LIAA  S  LA+S CT        +  + A GA +G+L G  +GA    +K   
Sbjct: 1   MRVHVPLIAACAS-LLALSACTVT-----EDNRRMATGAAIGALAGGALGATEDREK--- 51

Query: 61  KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS 120
             ALIGA  GA +G  +G  +D Q   L+ ++    V +  +G  +++ MP ++ F   S
Sbjct: 52  --ALIGAVVGAGVGAAIGDMLDRQARDLQAELGNDAVQIVNTGSELVVTMPQDILFAVDS 109

Query: 121 ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG 180
           A ++    + L  ++  L +YP T V V+G+TD+TG    N  LSQ+RA +VA+ L+  G
Sbjct: 110 AVVQSTLQSDLAALSRNLLDYPDTTVQVVGHTDNTGSAGYNQELSQRRASAVAAILLQNG 169

Query: 181 VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 218
           V +SR+   G G   PIASN    G+AQNRRVEI ++P
Sbjct: 170 VPSSRVVAFGRGEDQPIASNLDEAGRAQNRRVEIIITP 207