Pairwise Alignments

Query, 355 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 457 a.a., Membrane protein involved in the export of O-antigen and teichoic acid from Sphingomonas koreensis DSMZ 15582

 Score =  131 bits (329), Expect = 4e-35
 Identities = 96/340 (28%), Positives = 158/340 (46%), Gaps = 20/340 (5%)

Query: 23  AWLGSSNVVSALLGLLALSCAGKGMTPAMFGVLVIVQSYAKSISDFIKFQTWQLVVQYGT 82
           A L S N  +  +G++ L+     + PA+ G+L +V++Y + +   I+ +TWQ V++YG 
Sbjct: 20  AHLASGNATAIGIGMVTLALMAHMLGPALLGLLAMVEAYGRFMDQIIRLETWQAVIRYGA 79

Query: 83  PALTNNNPQQFRNVVSFSFSLDIVSGAVAIVGGIALL--PFLSHSLGLDDQSFWLAALYC 140
            AL   +  +F  +V F  +LDI+ GA+A  G +ALL  P +   +G   ++  +AA Y 
Sbjct: 80  GALEAGDDDRFAELVGFGIALDII-GALA-AGAVALLAIPLVGSWIGWGTEAQTMAAFYA 137

Query: 141 TLIPSMASSTPTGILRAVDRFDLIAVQQATKPFLRAAGSVVAWYFDFG----FAGFVIAW 196
             +    SSTPTG+LR  DRF LIA        LR     + W          A  +   
Sbjct: 138 IAVAFGISSTPTGVLRLFDRFALIAWVDPVLAVLRLIAVALVWALGGSVWELLAIAIAVP 197

Query: 197 YVSNLVGGTMYWWFAARELRRRNIHNAFKLNLFESARYIKGAWSFVWSTNIAHSIWSARN 256
            +  +    M W     ELRRR      + +   +    +G W+F+ S N A  +  +  
Sbjct: 198 CLQRVTLAVMAW----HELRRRGYRIRPRFDALINTGKFEGIWTFIVSANGAVLVRKSTQ 253

Query: 257 SCSTVLVGIVLGPAAAGLFKIAMTFFDAAGTPAGLLGKSFYPEVMRLDPRTTRPWLLGVK 316
               + VG V GP  AG++++   F  AA     +L +  +P++ RL  R     LLG  
Sbjct: 254 ELDILAVGAVAGPIGAGIYQLVRKFTLAAMKAGAMLQQVVFPDLARLWARRD---LLGFA 310

Query: 317 SG-----LLAGGIGILVALAVLIVGKPLISLVFGVKYLEA 351
           +      L    +G+   + V+  G   I L+ G ++ +A
Sbjct: 311 NAIRQIELFTLCVGVAFVVGVIFAGDIAIRLIAGPEFEDA 350