Pairwise Alignments

Query, 396 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 304 a.a., Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) from Herbaspirillum seropedicae SmR1

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 87/351 (24%), Positives = 141/351 (40%), Gaps = 59/351 (16%)

Query: 22  KDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASA 81
           K +L   + T DE + V++ +  +K                 + VF  NSTRTR S+ + 
Sbjct: 4   KHYLQFSDFTLDEYEYVIERSRVIKRKFKNYEPHHTLADRTLVMVFEKNSTRTRLSFEAG 63

Query: 82  LNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAAL 141
           ++ +G A   L+   SQ+  GE V + A ++S   D I IR          Y +E+   +
Sbjct: 64  MHQMGGAAIYLNTRDSQLGRGEPVEDAAQVMSRMCDVIMIR---------TYGQEI---I 111

Query: 142 DDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSY 201
           +   K   +P    L N Q    HP Q +AD+    EH GS++   GK +A  W      
Sbjct: 112 ERFAKHSRVPVINGLTNEQ----HPCQVLADVFTYIEHHGSIQ---GKIVA--WV----- 157

Query: 202 GKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAF 261
           G   ++    +     FG  V ++ P+GYD+ P  V     N       +       +A 
Sbjct: 158 GDANNMLYSWLQAAEVFGFHVNVSTPKGYDIDPAQVSPGNKN-------YTFFADPADAC 210

Query: 262 KDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTR 321
           +DAD+V    W       E    L+A D                    W   +  M   +
Sbjct: 211 QDADLVTTDVWTSMGFEAENNARLKAFD-------------------GWIVDQAKMARAK 251

Query: 322 DGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMI 372
             +AL+MHCLPA       +  EV   V +  +   ++EA  + ++  A++
Sbjct: 252 K-DALFMHCLPAH------RGEEVAAEVIDGPQSVVWEEAENRLHVQKALL 295