Pairwise Alignments

Query, 328 a.a., fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) from Escherichia coli BW25113

Subject, 351 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  195 bits (495), Expect = 2e-54
 Identities = 112/318 (35%), Positives = 173/318 (54%), Gaps = 20/318 (6%)

Query: 31  FAVLFIACAIF---VPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIAC 87
           F  L +  A F   VPNF T  N+  +   ++++G++A GM   + +G  DLSV +V   
Sbjct: 17  FIALLLVIAFFSVMVPNFLTTSNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGI 76

Query: 88  AGVTTAVVINLTESLWIG----------VAAGLLLGVLCGLVNGFVIAKLKINALITTLA 137
            G+    ++     LW G          +    L GVL G VNG VI +  +   I TL 
Sbjct: 77  CGMVAGALLTNGLPLWNGSVIFFNVPEVILCVALFGVLVGFVNGAVITRFGVAPFICTLG 136

Query: 138 TMQIVRGLAYIISDGKAV----GIE---DESFFALGYANWFGLPAPIWLTVACLIIFGLL 190
            M + RG A + +DG       G+E   +  F  LG     G+  PIWL +  L++   L
Sbjct: 137 MMYVARGSALLFNDGSTYPNLNGMEALGNTGFSTLGSGTLMGIYLPIWLMIGFLLLGYWL 196

Query: 191 LNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILASRMTSGQPMT 250
             KT  GR   AIGGNE AARLAGVP+V+ KI ++  SGL SA  G+I+AS++ +  PMT
Sbjct: 197 TTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCSAFVGLIVASQLQTAHPMT 256

Query: 251 SIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFAQYVVRGLI 310
              +E+  I A VLGG +L GG G+++  + G  ++  + + M ++ +S F Q V++G++
Sbjct: 257 GNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMVIKGVV 316

Query: 311 LLAAVIFDRYKQKAKRTV 328
           ++ AV+ D+++QK +  V
Sbjct: 317 IVTAVVVDQFQQKLQNKV 334