Pairwise Alignments

Query, 328 a.a., fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) from Escherichia coli BW25113

Subject, 329 a.a., ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  202 bits (514), Expect = 9e-57
 Identities = 117/325 (36%), Positives = 183/325 (56%), Gaps = 21/325 (6%)

Query: 9   SGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGM 68
           SG+  +     R   + G L+   +L I  +I  P F T  N+  +G+  +   ++A G 
Sbjct: 12  SGSVSTLDKVKRFASRNGALIGLIILCIILSIATPAFLTGPNLLNVGIQAATVAILAFGQ 71

Query: 69  LFCLASGDFDLSVASVIACAGVTTAVV-----INLTESLWIGVAAGLLLGVLCGLVNGFV 123
            F +     DLSV SV A + +  A       +    ++ +G+  G + G L G+ N F 
Sbjct: 72  TFVIVEAGIDLSVGSVAAVSSMLVAYTGASMGLPPILTIVVGLVTGAVFGALSGIANAF- 130

Query: 124 IAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFG-----LPAPIW 178
              LK+ + I TLA M + RGL  +ISDG+ V          G  N+FG     +P PI 
Sbjct: 131 ---LKLPSFIATLAMMSVARGLTLVISDGRPVSTS-------GMVNFFGSTVLGIPIPIV 180

Query: 179 LTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGII 238
           + +   +I  ++LN T+ GR+  A+GGN EA+RL+G+ V +T+I++FVLSG+ +A+AG++
Sbjct: 181 MMIIMGVIASVILNFTSIGRSMYAVGGNMEASRLSGISVHKTQIMVFVLSGIFAAVAGLV 240

Query: 239 LASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNI 298
           +A R+ S QP  + GYE+  I++ V+GG SL GG GKIS    G ++L  + N +N+LN+
Sbjct: 241 IAGRLHSAQPQAASGYEMDAIASVVIGGASLSGGKGKISGTFIGAILLAVIRNGLNILNV 300

Query: 299 SPFAQYVVRGLILLAAVIFDRYKQK 323
           S F Q VV GL++  AV FD  ++K
Sbjct: 301 SSFWQQVVIGLVIAFAVSFDTLRRK 325