Pairwise Alignments

Query, 155 a.a., outer membrane lipoprotein (NCBI) from Escherichia coli BW25113

Subject, 150 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score = 88.6 bits (218), Expect = 4e-23
 Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 5/153 (3%)

Query: 2   IKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGTIVNVRPVQIQGGDDSNV 61
           +K++LV++ +G  + GC      S  VY   +A+  Q V  G + ++R V I  G  S+ 
Sbjct: 1   MKKLLVIAALGSLVAGCAVTPN-SASVYNTRQAQGEQTVRMGVVESIRNVTIDKG--SSG 57

Query: 62  IGAIGGAVLGGFL-GNTVGGGTGRSLATAAGAVAGGVAGQGVQSAMNKTQGVELEIRKDD 120
           +G +GGA LGG   G+ +GGG G   A   GA+AGGV G   ++ ++   G+E+ +R D+
Sbjct: 58  VGTLGGAALGGIAAGSNIGGGNGALAAGIVGALAGGVLGNQAEAHLSNRPGLEITVRLDN 117

Query: 121 GNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVS 153
           G  +  + +  +  F  G+RV L SNG    V+
Sbjct: 118 GE-LRAITQDADEPFRVGERVRLLSNGRTTRVT 149