Pairwise Alignments

Query, 645 a.a., soluble lytic murein transglycosylase (VIMSS) from Escherichia coli BW25113

Subject, 648 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

 Score =  403 bits (1035), Expect = e-116
 Identities = 223/641 (34%), Positives = 356/641 (55%), Gaps = 7/641 (1%)

Query: 10  RLLAAGVCLLTVSSVARADS----LDEQRSRYAQIKQAWDNRQMDVVEQMMPGLKDYPLY 65
           R L + +   TV +V  A +    L+ QR++Y + ++  D + +   +++   +  YPL 
Sbjct: 10  RSLVSILMFTTVWAVGSASASTLDLEAQRAQYDKAQRWLDEKNVAQYQRIRKQIDSYPLT 69

Query: 66  PYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLAFSPEK 125
           PYL+YR    DL ++P + V NF+ ++   P +  + + +++ LAR + W  LL F  + 
Sbjct: 70  PYLDYRAFLIDLGSKPPIAVRNFIDSHKEYPFSARIAAPYLDALARSKKWSALLQFQTQL 129

Query: 126 PGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKLFSVWRASGKQDPLAYL 185
           P     QC+YY AK  TG+  EA++GAK+LWL G S  +ACD LF+ W   G       L
Sbjct: 130 PNGETYQCHYYNAKLQTGKRNEAFEGAKKLWLNGASIADACDPLFAEWDRVGGLSDDWVL 189

Query: 186 ERIRLAMKAGNTGLVTVLAGQMPADY-QTIASAIISLANNPNTVLTFARTTGATDFTRQM 244
           +R  LA +  N  L+  L  ++     Q  A  ++ L + P  VL ++R        +++
Sbjct: 190 KRALLAFEGRNRNLIVYLQKKLDGKKSQAKAQGMLELFDKPERVLAYSRKASQDPINQKL 249

Query: 245 AAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDD 304
           A +A    AR + + A+ +   +A+AQ  N++Q   +   +A RLM  +     AKWRD+
Sbjct: 250 AELALQKWARSEPQEAQAVFNDVAKAQGWNQEQKGRVARFIAIRLMDTEEA-AIAKWRDE 308

Query: 305 AIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAE 364
               SQ   LIE R+R+AL   D RGL+ W+A LP + ++   W+YWQ    +  G++ E
Sbjct: 309 VTRTSQDVRLIEARIRLALRENDWRGLSQWIAVLPEQERKTLRWQYWQGRSEIALGKKKE 368

Query: 365 AKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLD 424
             E L  L+ QR FY + AA+ + +           ++         +AR+ EL+  +  
Sbjct: 369 GTERLKALLGQRSFYSVAAAKILQQSVNYPTSTVTLDMKQIKAHKKALARIDELIALDKV 428

Query: 425 NTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLF 484
             A+SEW  L+   S+ E+  LA YA ++ W+ +++ ATI+  LWD+ + RFP+ + +LF
Sbjct: 429 PAAKSEWRWLLDRVSQKEKEMLAAYAADSGWYQMTIAATISASLWDNNQLRFPVVHQNLF 488

Query: 485 KRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSP 544
             +     +     M++ARQESA NP  +SPVGA GLMQIMP TA +T + + +  YS+P
Sbjct: 489 TLHGRKNGVDPITLMSLARQESALNPDAQSPVGARGLMQIMPDTARYTARKYQL-SYSNP 547

Query: 545 GQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVE 604
            +L     NI IG+ YL  + +++  NRI + AAYNAGP RV +WL  S G++DA  F+E
Sbjct: 548 DELYQVGKNIEIGSRYLSSLLERYDQNRILAFAAYNAGPSRVDSWLKRSQGKLDAYGFIE 607

Query: 605 SIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY 645
           +IPF+ETRGYV+N+L ++ YYR  MG +   ++  E   +Y
Sbjct: 608 AIPFAETRGYVQNILMFETYYRDLMGVQGRFLNEHELNTKY 648