Pairwise Alignments

Query, 460 a.a., predicted repair protein (NCBI) from Escherichia coli BW25113

Subject, 505 a.a., DNA repair protein RadA from Synechocystis sp000284455 PCC 6803

 Score =  365 bits (938), Expect = e-105
 Identities = 203/480 (42%), Positives = 299/480 (62%), Gaps = 26/480 (5%)

Query: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGV 60
           MAKA +  FVC+ CGAD+ +W G+C  CH + ++ E  + A      +  L      +  
Sbjct: 1   MAKA-RTKFVCSACGADHAQWFGRCPKCHEYGSLQEEIVNAVSSGTNHRSLGAQKSRSSK 59

Query: 61  AKVQK------LSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQ 114
            K  +       S I  E   RF +G+ E DRVLGGG+VPG+ ILIGG+PG GKSTLLLQ
Sbjct: 60  VKTGQPQAALTFSQIRQENQGRFLSGYGELDRVLGGGIVPGALILIGGDPGIGKSTLLLQ 119

Query: 115 TLCKLAQQM-KTLYVTGEESLQQVAMRAHRLGLPTD-----------------NLNMLSE 156
              +LA ++ + LYV+ EES QQ+ +RA RLG+                    NL +L E
Sbjct: 120 VAFQLATRLPRILYVSAEESGQQIKLRATRLGITQTVEPSQAQDGINNLAHDGNLFVLPE 179

Query: 157 TSIEQICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIV 216
           T+++ I    E  QP++ +IDSIQ ++   + S+PGSV+QVRE    L + AK   +++ 
Sbjct: 180 TNLDDILRELEALQPQVAIIDSIQNLYFPALSSAPGSVSQVRECTGLLMQLAKRDHISLF 239

Query: 217 MVGHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG 276
           +VGHVTK+G++AGPKVLEH +D  +   GD  +  R LRS KNRFGA  E+G+F M + G
Sbjct: 240 IVGHVTKEGAIAGPKVLEHLVDTVLYFQGDRFASHRLLRSVKNRFGATQEIGIFEMVQSG 299

Query: 277 LREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQN 336
           L+EV NPS +FL   +E  SG+++ V  EGTRPL+VE+QALV  +  A+PRR   G++ N
Sbjct: 300 LQEVLNPSQLFLGSREEFMSGTAITVACEGTRPLVVELQALVSPTSYASPRRSTTGVDYN 359

Query: 337 RLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVV 396
           RL  +LAVL +  G+ ++  D +++V GG++V E + DLA+ +A+V+S RDR +   +++
Sbjct: 360 RLLQVLAVLEKRLGVPLSKLDAYLSVAGGLEVEEPAVDLAMAIALVASFRDRVVDPTMII 419

Query: 397 FGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSV 456
            GE+GL G+IRPV   + R+ EAAK GF++AIVP      ++  G+++  V K+  A++V
Sbjct: 420 LGEIGLGGQIRPVSQLEIRLKEAAKLGFKKAIVPKGQTGIES-AGIKLIPVGKVFAAIAV 478