Pairwise Alignments

Query, 460 a.a., predicted repair protein (NCBI) from Escherichia coli BW25113

Subject, 460 a.a., DNA repair protein RadA from Rahnella sp. WP5

 Score =  838 bits (2166), Expect = 0.0
 Identities = 420/460 (91%), Positives = 445/460 (96%)

Query: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGV 60
           MAKA KRAFVCNECGADYPRWQGQCSAC AWN+ITE+RLAASP VARNERL+GYAG AGV
Sbjct: 1   MAKAAKRAFVCNECGADYPRWQGQCSACQAWNSITEIRLAASPTVARNERLTGYAGDAGV 60

Query: 61  AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120
           ++VQKLSDISL+ELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQ LC L+
Sbjct: 61  SRVQKLSDISLDELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQILCHLS 120

Query: 121 QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ 180
           + MKTLYVTGEESLQQVAMRAHRLGLPT N+NMLSETSIEQIC IA++EQPKLMVIDSIQ
Sbjct: 121 ENMKTLYVTGEESLQQVAMRAHRLGLPTANMNMLSETSIEQICEIADKEQPKLMVIDSIQ 180

Query: 181 VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240
           VMHMAD+QSSPG+VAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
Sbjct: 181 VMHMADIQSSPGTVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240

Query: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV 300
           VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDE+TSGSSV
Sbjct: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITSGSSV 300

Query: 301 MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV 360
           MV+WEGTRPLLVE+QALVD SMM NPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
Sbjct: 301 MVLWEGTRPLLVEVQALVDQSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV 360

Query: 361 NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 420
           NVVGGVKVTETSADLALL+++VSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERI+EAA
Sbjct: 361 NVVGGVKVTETSADLALLMSLVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERITEAA 420

Query: 421 KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL 460
           KHGF+RAIVP ANVPKK P GMQ+FGVKKL+DAL++ DDL
Sbjct: 421 KHGFKRAIVPHANVPKKVPAGMQVFGVKKLADALAILDDL 460