Pairwise Alignments

Query, 716 a.a., putative carbon starvation protein (VIMSS) from Escherichia coli BW25113

Subject, 603 a.a., Carbon starvation protein CstA (NCBI) from Rhodospirillum rubrum S1H

 Score =  437 bits (1124), Expect = e-127
 Identities = 253/678 (37%), Positives = 384/678 (56%), Gaps = 85/678 (12%)

Query: 35  SALWIVVASVSVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHH 94
           +AL  V++++ +  + YR+Y ++  +KV++ D +  TP+    DG NYVPT ++V  G H
Sbjct: 3   NALTFVISTLCILALCYRFYGVFFVRKVLRADDSVVTPSHTFEDGKNYVPTKKWVNAGQH 62

Query: 95  FAAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIK 154
           FAAIA AGPLVGPVLAAQ GYLPG LWLL G V+ GAV D +VLF S + NG SL  + K
Sbjct: 63  FAAIAAAGPLVGPVLAAQFGYLPGFLWLLVGCVVGGAVHDTVVLFASMKHNGKSLSNVAK 122

Query: 155 EEMGPVPGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRF 214
            E+GPV G         I+ I +A L+++VV AL  +PWG F V  T+PIA+ +G+Y RF
Sbjct: 123 AELGPVAGWCTGLAMLFIITITMAGLSMVVVHALERNPWGTFAVFMTIPIAIAVGLYERF 182

Query: 215 IRPGRVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPV 274
              G     + +GI+ ++ ++  G  I      G  LT +  ++  AL  YAF ++ LPV
Sbjct: 183 --TGNHKGATWVGIIAIMVAVLAGPYI-QGTLLGDWLTLRVDSVALALPIYAFFASALPV 239

Query: 275 WLILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFIT 334
           WL+L PR YL++F+KIGV   L +G+V++NP ++ PA+T +I G GP+  G ++PF+ IT
Sbjct: 240 WLLLTPRGYLSSFMKIGVFGALVVGVVIINPTIQFPALTDFIHGGGPVLAGPVWPFISIT 299

Query: 335 IACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLYFA 394
           IACGA+SGFHA I SGTTPKL+   +D R + +GAML E  VA++ALVAA+ + P  YFA
Sbjct: 300 IACGAISGFHAFIGSGTTPKLVDKWSDIRPVAFGAMLAECMVAVLALVAATALHPADYFA 359

Query: 395 MNTPP---AGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQTA 451
           +N  P   A LG+ + +L  +                                      +
Sbjct: 360 INASPAAFASLGMEVVDLPHL--------------------------------------S 381

Query: 452 KDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADM-GFWYHFGILFEALFILTALDAGTR 510
           ++IG   +  R GGA TLAVG+  +F K+   A +  +++ F I+FEA+FILTA+D+GTR
Sbjct: 382 QEIG-MDLAGRTGGAVTLAVGMTFIFTKLPWFATLSSYFFQFVIMFEAVFILTAVDSGTR 440

Query: 511 SGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLWPLFG 570
             R+++QDL G+    LK+ D +   I  +     LWGYLL        G + S+W LFG
Sbjct: 441 VARYLIQDLGGDLYAPLKRLDWIPGSIGASVAACALWGYLLTS------GDINSVWALFG 494

Query: 571 ISNQMLAAVALVLGTVVLIKMKRTQ-YIWVTVVPAVWLLICTTWALGLKLFSTNPQMEGF 629
           +SNQ++A++ L++G  +++++   + Y+   ++P  +L +   +A             G+
Sbjct: 495 VSNQLMASIGLIIGATIILRVAAKRIYMLTCLIPLAYLFVTVNYA-------------GY 541

Query: 630 FYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYGF---KTW 686
           + +A+ Y    A G                 N  NAG+S + +++   I+   F   KT 
Sbjct: 542 WMIANVYLNTQARG----------------YNPINAGISAIMMVLGLIILITAFGKWKTM 585

Query: 687 LAVRNSDKRTDKETPYVP 704
           LA+  S +  +   P +P
Sbjct: 586 LALPKSLRSGEVPAPSLP 603