Pairwise Alignments

Query, 716 a.a., putative carbon starvation protein (VIMSS) from Escherichia coli BW25113

Subject, 758 a.a., Probable carbon starvation protein A homolog CstA from Mycobacterium tuberculosis H37Rv

 Score =  615 bits (1585), Expect = e-180
 Identities = 323/684 (47%), Positives = 456/684 (66%), Gaps = 39/684 (5%)

Query: 12  WVILGIIGAFCLAVVALRRGEHISALWIVVASVSVYLVAYRYYSLYIAQKVMKLDPTRAT 71
           +V + +IGA    VVA  R E ++A+WIVVA+   Y++ +R+Y+  I  KV++     AT
Sbjct: 45  FVAVAVIGALAWTVVAFFRNEPVNAVWIVVAAGCTYIIGFRFYARLIEMKVVRPRDDHAT 104

Query: 72  PAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGA 131
           PA I +DG +YVPT+R V+FGHHFAAIAGAGPLVGPVLA QMGYLP ++W++ G VLAG 
Sbjct: 105 PAEILDDGTDYVPTDRRVVFGHHFAAIAGAGPLVGPVLATQMGYLPSSIWIVVGAVLAGC 164

Query: 132 VQDFMVLFISSRRNGASLGEMIKEEMGPVPGTIALFGCFLIMIIILAVLALIVVKALAES 191
           VQD++VL+IS RR G SLG+M+++E+G   G  AL G  +I+ I++AVLAL+VV+ALA+S
Sbjct: 165 VQDYLVLWISVRRRGRSLGQMVRDELGATAGVAALVGIPVIITIVIAVLALVVVRALAKS 224

Query: 192 PWGVFTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASIYFGGVIAHDPYWGPAL 251
           PWGVF++  T+PIA+FMG Y+RF+RPGRV EVS+IGI LL+ ++  G  +AH  +     
Sbjct: 225 PWGVFSIAMTIPIAIFMGCYLRFLRPGRVSEVSLIGIGLLLLAVVSGDWVAHTSWGAAWF 284

Query: 252 TFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPA 311
           +    T+ + LI Y F +++LPVWL+LAPRDYL+TF+K+G I  LA+G+   +P ++ PA
Sbjct: 285 SLSPVTLCWLLISYGFAASVLPVWLLLAPRDYLSTFMKVGTIALLAIGVCAAHPIIEAPA 344

Query: 312 MTQYI-DGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLANETDARFIGYGAM 370
           ++++   G GP++ G+LFPFLFITIACGA+SGFHALI SGTTPK+L  E   R IGYG M
Sbjct: 345 VSKFAGSGNGPVFAGSLFPFLFITIACGALSGFHALICSGTTPKMLEKEGQMRVIGYGGM 404

Query: 371 LMESFVAIMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAH 430
           + ESFVA++AL+ A+I++  LYF +N          P+LH               D  A 
Sbjct: 405 MTESFVAVIALLTAAILDQHLYFTLNA---------PSLH-------------THDSAAT 442

Query: 431 AAATVSSWGFV---ISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADM- 486
           AA  V+  G     ++P+ I Q A  +GE ++++R GGAPTLA G+A + H+V+    + 
Sbjct: 443 AAKYVNGLGLTGSPVTPDHISQAAASVGEQTIVSRTGGAPTLAFGMAEMLHRVVGGVGLK 502

Query: 487 GFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGC--- 543
            FWYHF I+FEALFILT +DAGTR+ RFM+ D LGNF   L+K  +  +   G   C   
Sbjct: 503 AFWYHFAIMFEALFILTTVDAGTRAARFMISDALGNFGGVLRKLQN-PSWRPGAWACRLV 561

Query: 544 -VGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVV 602
            V  WG +L  GV DPLGG+ +L+PLFGI+NQ+LA +AL + TVV+IK  R ++ W+  +
Sbjct: 562 VVAAWGSILLLGVTDPLGGINTLFPLFGIANQLLAGIALTVITVVVIKKGRLKWAWIPGI 621

Query: 603 PAVWLLICTTWALGLKLFSTNPQM----EGFFYMASQYKEKIANGTDLTAQQIANMNHIV 658
           P +W L  T  A   K+FS +P +    +   Y A+Q+  + A G+   A +I   N +V
Sbjct: 622 PLLWDLAVTLTASWQKIFSADPSVGYWTQHAHYAAAQHAGETAFGSATNADEI---NDVV 678

Query: 659 VNNYTNAGLSILFLIVVYSIIFYG 682
            N +    LSI+F++VV  ++  G
Sbjct: 679 RNTFVQGTLSIVFVVVVVLVVVAG 702