Pairwise Alignments

Query, 304 a.a., methylated adenine and cytosine restriction protein (NCBI) from Escherichia coli BW25113

Subject, 296 a.a., putative restriction endonuclease from Xanthomonas campestris pv. campestris strain 8004

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 76/270 (28%), Positives = 110/270 (40%), Gaps = 27/270 (10%)

Query: 17  LATKPEGAAARDVHEAAADALGLDDSQRAKVITSGQLVYKNRAGWAHDRLKRAGLSQSLS 76
           L T+PEG  A D   A    + L + +     T G+   K         +K   L +   
Sbjct: 20  LKTQPEGMRAADALAALEKQVVLTEYEAGDYETGGRRFEKIVRFSTVAPVKAGWLVKD-- 77

Query: 77  RGKWCLTPAGFDWVASHPQPMTEQETNHLAFAFVNVKLKSRPDAVDLDPKADSPDHEELA 136
           +G W LTP G    A H  P  EQ         V    K    A  +  + D P+  ELA
Sbjct: 78  KGIWTLTPEG--EAALHAYPDPEQ-----FIRAVGQLYKKWKSAQPVAEEVDDPE-GELA 129

Query: 137 KSSPDDRLDQALKELRDAVADEVLENLLQVSPSRFEVIVLDVLHRLGYGGHRDDLQRVGG 196
           + S    L++A     +    E+   L  + P  F+ +V  +L  +GY      +  V  
Sbjct: 130 EESASITLEEA----EEMAWAEIEAYLAAMPPYDFQELVASLLRAMGY-----HVAWVAP 180

Query: 197 TG-DGGIDGVISLDKLGLE--KVYVQAKRWQNT--VGRPELQAFYGALAGQKAKRGVFIT 251
            G DGG D +   D LG    ++ VQ KR  N+  +    L++F   L       G+F+ 
Sbjct: 181 PGKDGGTDIIAYNDPLGTRPPRIKVQVKRNANSPRIDVTGLRSFMAVLGDGDV--GLFVA 238

Query: 252 TSGFTSQA-RDFAQSVEGMVLVDGERLVHL 280
            SGFT  A  +  QS   + L+D  RLV L
Sbjct: 239 LSGFTKDADYEARQSHRRINLIDARRLVEL 268