Pairwise Alignments

Query, 332 a.a., DNA-binding transcriptional repressor, 5-gluconate-binding (NCBI) from Escherichia coli BW25113

Subject, 339 a.a., Transcriptional regulators from Pseudomonas stutzeri RCH2

 Score =  169 bits (427), Expect = 1e-46
 Identities = 106/326 (32%), Positives = 178/326 (54%), Gaps = 7/326 (2%)

Query: 5   RISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSY 64
           R++L D+A  AG + M+ SR +  P  V+    ER+   ++ + Y+P+ A   L +++S 
Sbjct: 11  RVTLSDVARSAGCSLMSASRALSQPDLVSDALRERVELAVKALGYVPHPAARSLASSRSN 70

Query: 65  TLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGII 124
            + ++IPS  N +F D +  I+ V     Y+ +I   +Y  + +E  +   L++   G++
Sbjct: 71  LVAVIIPSLSNAVFVDTVEAIQRVLMPAGYEMMIGVSHYRPEEDERLLRAYLAHQPAGLL 130

Query: 125 LS--EKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVRH 182
           L+  E+    R V  L + T P+V LM++     D  VGF   +A   M  T+LE+  RH
Sbjct: 131 LTGFERSDAARAV--LANYTAPMVTLMELSERPDDYCVGFSQLEAGVAMTRTLLERGYRH 188

Query: 183 KILYLGSKDDTRDEQRYQGYCDAM-MLHNLSP-LRMNPRAISSIHLGMQLMRDALSANPD 240
            + +  ++ D R  QR +GY  AM       P L +    +SSI LG +L+   L+ +P 
Sbjct: 189 -VAFAAAQLDPRTLQRAEGYRQAMRQAGRYEPTLELLTPQLSSIGLGAELLDRLLAQHPQ 247

Query: 241 LDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGR 300
           +D VF  NDD+A+GAL    +  L VP +++IAGF+ L     M P+L++V T R +IG 
Sbjct: 248 IDAVFFNNDDLALGALFRAHQLGLEVPGRLAIAGFNDLPAAAWMHPALSTVRTRRGEIGE 307

Query: 301 MAAQMLLSKIKNNDHNHNTVDLGYQI 326
           +AAQMLLS ++        +D+G+++
Sbjct: 308 LAAQMLLSLMRGQQPAERCIDVGFEV 333