Pairwise Alignments

Query, 332 a.a., DNA-binding transcriptional repressor, 5-gluconate-binding (NCBI) from Escherichia coli BW25113

Subject, 335 a.a., transcriptional regulator, LacI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  157 bits (398), Expect = 3e-43
 Identities = 96/313 (30%), Positives = 168/313 (53%), Gaps = 4/313 (1%)

Query: 5   RISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSY 64
           R +L+ +A  AGV+ ++ SR +R    V++    ++     ++ Y  NR  G L +  S 
Sbjct: 7   RPTLKHVAARAGVSLISASRVMRGAPNVSEALRAKVEAAAADLGYSRNRIAGSLRSQASD 66

Query: 65  TLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGII 124
            + +++PS  N +F  I+ GI++      ++ ++    Y+   EE  + +LLS+    +I
Sbjct: 67  LIAVIVPSMSNHVFPPIVDGIDTALRGSRFRPVLGMTGYETSMEETILRDLLSWTPAAVI 126

Query: 125 LSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVRHKI 184
           LS   H+  T   LR    PV+EL+D     +D+ VG  ++ AA  M+   L  R   +I
Sbjct: 127 LSGLEHSPGTRALLRRHDGPVIELLDTDAPPIDLSVGV-SQAAAGRMMAAHLIDRGYSRI 185

Query: 185 LYLGSKD--DTRDEQRYQGYCDAMMLHNLSPLRMN-PRAISSIHLGMQLMRDALSANPDL 241
            ++G+    DTR  +R      A+    L+PL  +   A SS+ +G   +R    A+P+L
Sbjct: 186 GFVGAWGGRDTRATKRQDALARAVAAAGLAPLAQHIADAPSSLCVGADALRALRRAHPEL 245

Query: 242 DGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRM 301
           D V   NDD+A+GAL  C+   +AVP+ +++AGF+GL++ + + P L ++ TPRF+IG+ 
Sbjct: 246 DAVVFANDDLALGALFACQSDGIAVPDTLALAGFNGLDMCQVITPRLTTIQTPRFEIGQQ 305

Query: 302 AAQMLLSKIKNND 314
           A  +L  ++   D
Sbjct: 306 AGTLLRDRLSGKD 318