Pairwise Alignments

Query, 366 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 369 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  233 bits (595), Expect = 5e-66
 Identities = 128/368 (34%), Positives = 216/368 (58%), Gaps = 3/368 (0%)

Query: 1   MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMA 60
           MI+ RYL +E  K+Q+A+L +LL +F  Q  VR+L  A DG+ PA+LV++LLGL +P +A
Sbjct: 1   MIVFRYLFKEVFKAQIAVLLVLLTVFISQHFVRVLADASDGEFPASLVVTLLGLNLPYLA 60

Query: 61  QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120
            L+LPLSLFLG+LM  G++Y E+E+ V H  G+S+  + +  ++LAV   +      ++ 
Sbjct: 61  VLVLPLSLFLGILMAHGRMYAENEMVVFHGVGVSEWYVTRVTLLLAVLNMLFTGYLSLFV 120

Query: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESV-DGSDFKDVFLAQIRP 179
            PW+   Q++VL +A++  G+AAL QG+FQ + +G +VLF+E +   ++ + VF+AQ+  
Sbjct: 121 TPWAEERQNQVLEKAQSEAGLAALVQGRFQTSPDGRAVLFVEKIGKDNELEKVFVAQLPD 180

Query: 180 KG--NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQ 237
               + + ++V A  G + +   G+Q + LN G R++G+    D+++ +F  Y   I  Q
Sbjct: 181 PDDEHGQINLVSAAGGKVVEDASGAQQLKLNDGVRYQGSPKSLDYQVLEFGGYGMQIKEQ 240

Query: 238 AVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVL 297
            V         + +  L + +T  A AEL+WRI +   + +M L+ VP++ VN RQG+  
Sbjct: 241 EVDERRRKMSALPLNQLLDQNTPEAVAELHWRIAIPLAIPLMTLIAVPMARVNVRQGKFA 300

Query: 298 SMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLR 357
            MLPA+LLYL +F +  + +       +   + MW ++L  L + I+L   +     +L 
Sbjct: 301 KMLPAILLYLGYFGLMVAGRKALEDEVVPAFMGMWWIHLSALVMGIMLLGKERPLGAKLS 360

Query: 358 ASFSRKGA 365
             F R+ A
Sbjct: 361 GRFKRRAA 368