Pairwise Alignments

Query, 366 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 365 a.a., permease from Burkholderia phytofirmans PsJN

 Score =  151 bits (382), Expect = 2e-41
 Identities = 110/366 (30%), Positives = 181/366 (49%), Gaps = 9/366 (2%)

Query: 1   MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMA 60
           MI  R L RE   +  A+  +LL +     ++RI+G A  G+I    VL L+GL V    
Sbjct: 1   MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYL 60

Query: 61  QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120
            ++L  +LF+ +L  L + Y +SE+ V  + G+S    +K   I A    I+    V   
Sbjct: 61  AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVG 120

Query: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIE--SVDGSDFKDVFLAQIR 178
            PWS++    + A  +    ++ LA GQF+++     V FIE  S D +  ++VF+    
Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSADQARVENVFVTSTE 180

Query: 179 PKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQA 238
              N + +VVV+ +GH    ++G + V L  G R++G     DFRI +F+ Y   I  Q 
Sbjct: 181 ---NGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQP 237

Query: 239 VALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLS 298
           V   P+ T    +  L N   D   AE  WR  L      + L+ +PL+  NPR+ R ++
Sbjct: 238 VVNTPSTTGTPTLTLLRNPTNDNL-AEFAWRAGLPLIAINLMLLAIPLAHQNPRRSRTIN 296

Query: 299 MLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRL-- 356
           ++ A+L+YL +  +   ++S   +GK+   + +  +++I  A+ +    W  V  R L  
Sbjct: 297 LVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAI-VAFIFWLRVRNRPLFT 355

Query: 357 RASFSR 362
           RA FSR
Sbjct: 356 RAMFSR 361