Pairwise Alignments

Query, 128 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 128 a.a., endoribonuclease L-PSP, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  104 bits (259), Expect = 5e-28
 Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 4/126 (3%)

Query: 1   MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPV-NPKTGEVPADVAAQARQSLDNVKA 59
           M   I  E AP AIGPY  G   GN+I TSGQ+PV   K G V   ++ Q+ Q L+N+K 
Sbjct: 2   MKSIIHAERAPTAIGPYSHGTRYGNLIFTSGQLPVCKDKGGVVDGGISEQSVQCLENLKY 61

Query: 60  IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 119
           ++EA G  +  ++KTT ++ +++DFA  N  Y+ +F       PARSC  V  LP  VK+
Sbjct: 62  VLEAGGGSLDTVLKTTCYLSEISDFAAFNEVYKTYF---KTDCPARSCFAVKDLPLGVKV 118

Query: 120 EIEAIA 125
           EIEAIA
Sbjct: 119 EIEAIA 124