Pairwise Alignments

Query, 331 a.a., putative transport system permease protein (VIMSS) from Escherichia coli BW25113

Subject, 325 a.a., sugar ABC transporter permease from Azospirillum brasilense Sp245

 Score =  378 bits (971), Expect = e-110
 Identities = 193/322 (59%), Positives = 234/322 (72%)

Query: 1   MIKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGG 60
           MI R LPL++T  V V+G+L C  QFP FAS RV+ N+LTDNAFLGI AVGMTFVILSGG
Sbjct: 1   MIHRFLPLLVTSAVLVVGFLLCAAQFPNFASLRVVGNLLTDNAFLGITAVGMTFVILSGG 60

Query: 61  IDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT 120
           IDLSVG+VI FT V LA +I   G  P+ AF + L +   FGA MG +I   ++P FI+T
Sbjct: 61  IDLSVGAVIGFTTVLLAVLIEQGGWHPVSAFAVALAVAGGFGAAMGAVIHVFQMPPFIVT 120

Query: 121 LAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGIFLA 180
           LAGMF  RG+ +++S +SIPINHP+Y  L  LA +  GGG+L+   LLML VV   +  A
Sbjct: 121 LAGMFVARGLGFVLSTDSIPINHPLYAELGDLALRFDGGGKLTLPALLMLGVVAAAVVCA 180

Query: 181 HRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG 240
           H TRFG  +YA+GGN  SA LMG+    TT+ +Y LS  LA LAGIVFS+YT AGY+LA 
Sbjct: 181 HWTRFGANLYALGGNRQSAELMGVPVGRTTVAVYALSGLLAGLAGIVFSLYTGAGYSLAA 240

Query: 241 VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL 300
            GVELD I +VVIGGT L+GG G V+GT  GV IQGLIQTYI FDG+LSSWWTKIAIG+L
Sbjct: 241 TGVELDTITAVVIGGTQLTGGYGYVIGTFIGVLIQGLIQTYITFDGSLSSWWTKIAIGVL 300

Query: 301 LFIFIALQRGLTVLWENRQSSP 322
           LF+FI LQ+GL  +W  R  +P
Sbjct: 301 LFVFILLQKGLLAVWTGRGGAP 322