Pairwise Alignments

Query, 331 a.a., putative transport system permease protein (VIMSS) from Escherichia coli BW25113

Subject, 357 a.a., galactofuranose ABC transporter, permease protein YjfF from Ralstonia sp. UNC404CL21Col

 Score =  290 bits (743), Expect = 3e-83
 Identities = 149/308 (48%), Positives = 205/308 (66%)

Query: 4   RNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDL 63
           R LP  +T+ +F L + +    + GF S +V  N+L DNAFL ++A+GMTFVILSGGIDL
Sbjct: 6   RRLPFYVTLFLFALLFGFGSVTYTGFFSVQVFLNLLIDNAFLIVVAIGMTFVILSGGIDL 65

Query: 64  SVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAG 123
           SVG+V+A T +  A ++   G S  +  PLVL +GC FG  MG+LI   +I  FI+TL G
Sbjct: 66  SVGAVVALTTMISAALVEHHGWSIGVVVPLVLAVGCLFGLVMGVLIQVFRIQPFIVTLGG 125

Query: 124 MFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGIFLAHRT 183
           MF  RG+ YL+S +SI I  PIY  LS    ++ GG  +S   ++ L V  +  +LAH +
Sbjct: 126 MFLARGLCYLISIDSISITDPIYTALSQYKIQVGGGNYVSPSVVIALVVFAVAAWLAHCS 185

Query: 184 RFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGV 243
           RFG  VYA+GGN  SA LMG+    T I +Y+LS   + L G++ ++Y  +GY L   G+
Sbjct: 186 RFGRTVYALGGNERSALLMGLPVARTRILVYVLSGFCSALGGVLVTLYMLSGYGLHAQGM 245

Query: 244 ELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFI 303
           ELDAIA+ V+GGTLL+GGVG + G++ GV + G+IQ+ I FDGTLSSWW +IAIG+LL +
Sbjct: 246 ELDAIAATVVGGTLLTGGVGLISGSVVGVLLLGVIQSLITFDGTLSSWWARIAIGVLLCV 305

Query: 304 FIALQRGL 311
           F  +QR L
Sbjct: 306 FCLMQRFL 313