Pairwise Alignments

Query, 331 a.a., putative transport system permease protein (VIMSS) from Escherichia coli BW25113

Subject, 365 a.a., ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  286 bits (731), Expect = 7e-82
 Identities = 155/306 (50%), Positives = 202/306 (66%), Gaps = 1/306 (0%)

Query: 4   RNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDL 63
           R LP+ +TI +F   + +    + GF S +V+ ++L DNAFL I+A+GMTFVI+SGGIDL
Sbjct: 15  RTLPIAVTILLFCALFGFGSVMYTGFFSWQVLLDLLVDNAFLLIVAIGMTFVIVSGGIDL 74

Query: 64  SVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAG 123
           SVGSV+A T +  A +         +  P VL+MG  FGA  G LI   ++ AFI+TLAG
Sbjct: 75  SVGSVVALTTIVEAVLSEHLHWPVWVILPTVLLMGTVFGAVQGALIHFFRLQAFIVTLAG 134

Query: 124 MFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGIFLAHRT 183
           MFF RG+ +L++ +SI I  P +  +S+    I G G ++A  L+    ++  I++AH T
Sbjct: 135 MFFARGLCFLITTQSITITDPTFQKISAFRLDI-GVGSVTANVLIAFVTLLAAIYVAHFT 193

Query: 184 RFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGV 243
           RFG  VYAIGGNA SA LMG+    T I +Y LS   + L G VF+ Y  +GY L G G+
Sbjct: 194 RFGRNVYAIGGNARSALLMGLPVAHTRIGVYALSGFCSALGGAVFTFYVLSGYGLQGQGM 253

Query: 244 ELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFI 303
           ELDAIA+ VIGGTLL+GGVG V+G+LFGV I G IQT I FDGTLSSWWT+I IG LL  
Sbjct: 254 ELDAIAATVIGGTLLTGGVGYVIGSLFGVGILGTIQTLITFDGTLSSWWTRIVIGALLCA 313

Query: 304 FIALQR 309
           F  LQR
Sbjct: 314 FCLLQR 319