Pairwise Alignments

Query, 334 a.a., modulator for HflB protease specific for phage lambda cII repressor (NCBI) from Escherichia coli BW25113

Subject, 289 a.a., membrane protease HflC from Pseudomonas fluorescens FW300-N2C3

 Score =  225 bits (573), Expect = 1e-63
 Identities = 126/328 (38%), Positives = 191/328 (58%), Gaps = 49/328 (14%)

Query: 3   KSVIAIII--IVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIE 60
           KS+IA+I+  +V +  +   ++V + ER + L+FG+V++ D       +PGLH K+P++ 
Sbjct: 4   KSLIALIVGVVVAIAAWNCFYIVAQTERAVLLQFGRVVQAD------VQPGLHVKVPYVN 57

Query: 61  TVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQ-AEVLL 119
            V+  DAR+ T+D    RF+T EKK ++VD+Y KWR+ D  R+Y AT G  + Q A+  L
Sbjct: 58  KVRKFDARLMTLDAPTQRFLTLEKKAVMVDAYAKWRVKDAERFYTATSG--LKQIADERL 115

Query: 120 KRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAA 179
            R+    LR + G+  + ++V+  R  L  ++  +LN+                     A
Sbjct: 116 SRRLESGLRDQFGKRTLHEVVSGERDALMADITRSLNT--------------------MA 155

Query: 180 ERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHR 239
           E+                   LGIEVVDVR+K I+LP EV+ +++ RM  ERE  AR HR
Sbjct: 156 EK------------------ELGIEVVDVRVKAIDLPKEVNRSVFERMSTEREREAREHR 197

Query: 240 SQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRS 299
           ++G E AE +RA AD +    LAEA R+   +RG+GDA+AA +++ A+ +D +FYAF RS
Sbjct: 198 AKGNELAEGIRADADRQRRVLLAEAYRESEEVRGDGDAQAAAIYSKAYGQDQEFYAFYRS 257

Query: 300 LRAYENSFSGNQDVMVMSPDSDFFRYMK 327
           LRAY  SF+   DVMV+ P SDFF Y++
Sbjct: 258 LRAYRESFANKSDVMVLDPSSDFFHYLE 285