Pairwise Alignments

Query, 334 a.a., modulator for HflB protease specific for phage lambda cII repressor (NCBI) from Escherichia coli BW25113

Subject, 315 a.a., membrane protein from Azospirillum brasilense Sp245

 Score =  188 bits (477), Expect = 2e-52
 Identities = 110/317 (34%), Positives = 179/317 (56%), Gaps = 47/317 (14%)

Query: 9   IIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDAR 68
           I+   V+   S+F V E ++ + L+FG+ +R      ++ EPGL  K+PFI+ V++LD R
Sbjct: 12  ILAAGVLASASLFTVNEAQQALVLQFGEPMR------VIREPGLKAKVPFIQEVRILDRR 65

Query: 69  IQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLKRKFSDRLR 128
           +  +D   ++ +  ++K L VD++ ++RI D  R+Y   G   +  AE  +    +  LR
Sbjct: 66  VLDLDPPVEQVILADQKRLDVDAFARYRILDPLRFYQTAGNEAV--AETRMNAIVNSALR 123

Query: 129 SEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAERVTAETKG 188
             +G + +  I++D R R+  ++R  +N                    + A+R       
Sbjct: 124 RVLGSVTLLAILSDERPRVMNDIRGQVN--------------------DEAKR------- 156

Query: 189 KVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRSQGQEEAEK 248
                        GIE+VDVRI++ +LP E S++I+ RMR+ERE  A   R+QGQE++++
Sbjct: 157 ------------FGIEIVDVRIRRADLPEETSQSIFARMRSEREREAAEARAQGQEQSQQ 204

Query: 249 LRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSLRAYENSFS 308
           +R+ AD E T  LAEA+R  +I+RGEGD +A K+ A+A S+DP FY+F R+L AY  S +
Sbjct: 205 IRSRADRERTVILAEAQRDSQILRGEGDNQALKMIAEATSQDPQFYSFYRTLEAYRKSLN 264

Query: 309 GNQDVMVMSPDSDFFRY 325
            +   MV+SP  +FFRY
Sbjct: 265 KDDTTMVLSPTGEFFRY 281