Pairwise Alignments

Query, 334 a.a., modulator for HflB protease specific for phage lambda cII repressor (NCBI) from Escherichia coli BW25113

Subject, 302 a.a., membrane protein from Cupriavidus basilensis FW507-4G11

 Score =  200 bits (508), Expect = 4e-56
 Identities = 117/331 (35%), Positives = 188/331 (56%), Gaps = 48/331 (14%)

Query: 4   SVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPF-IETV 62
           SV+  + +VL +    VFVV + +  +   FG++      K +V EPGLHFK+P  ++ V
Sbjct: 6   SVVIGLFVVLAIGSSMVFVVDQRQYAVVFAFGQI------KQVVNEPGLHFKLPPPLQNV 59

Query: 63  KMLDARIQTMDNQA-DRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLKR 121
             +D R+ T+D  A +RF+T EKK ++VD ++KWRI+D  ++Y+A  G +I  A+  + +
Sbjct: 60  IFMDRRLLTIDVAASERFLTAEKKSMVVDWFVKWRITDPRKFYVAFNG-NIRGAQDRMTQ 118

Query: 122 KFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAER 181
           +     R E G+  V ++V   R ++   +R A+                    A+ A+ 
Sbjct: 119 RIDSVAREEFGKRTVAELVAGEREKVMQNIRSAM--------------------ADYAQS 158

Query: 182 VTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRSQ 241
           V                   G+E++DVR+K+++L   +SE++Y RM AER+ VA   RS 
Sbjct: 159 V-------------------GVEIIDVRLKRVDLLPAISESVYRRMEAERKRVANELRST 199

Query: 242 GQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSLR 301
           G  E EK+RA AD +    LAEA R  + ++GEGDA A++++A++F +DP F  F RS+ 
Sbjct: 200 GAAEGEKIRADADRQREVVLAEAYRDAQKIKGEGDARASQIYAESFGRDPQFAQFWRSME 259

Query: 302 AYENSFSGNQDVMVMSPDSDFFRYMKTPTSA 332
           AY N+F   +DV+V+ P+SDFFRYM++   A
Sbjct: 260 AYRNTFRDKRDVLVLEPNSDFFRYMRSSGGA 290