Pairwise Alignments

Query, 334 a.a., modulator for HflB protease specific for phage lambda cII repressor (NCBI) from Escherichia coli BW25113

Subject, 300 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  157 bits (398), Expect = 2e-43
 Identities = 106/331 (32%), Positives = 181/331 (54%), Gaps = 53/331 (16%)

Query: 5   VIAIIIIVLVVLYMS---VFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPF-IE 60
           +IA+++ V++VL+ +   VFVV +    +    G      D  P +  PGLH K+P  ++
Sbjct: 4   IIALVVAVVIVLFAASSMVFVVDQRHMAVLSSHG------DAAPSLLGPGLHVKLPPPLQ 57

Query: 61  TVKMLDARIQTMDN-QADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLL 119
           TV ++D RIQ++D    DR+VT +K DL+ +  +K+R++D  +    T G          
Sbjct: 58  TVTLVDNRIQSLDAPDEDRYVTSDKIDLLANPVLKYRVTDPLKLLAETRGD--------- 108

Query: 120 KRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAA 179
            +   DRL      L  +  + D+  ++TL   DAL              A   A+A+ A
Sbjct: 109 AQSLPDRLA-----LLSRGALGDAFAKVTLS--DAL--------------ARQQAVADEA 147

Query: 180 ERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHR 239
                +           + A+LG+ VVDV++ +++ P  +++++Y RM A R+ VA   R
Sbjct: 148 RAAMDK-----------AAASLGVSVVDVQLTRVDFPASMADSVYKRMIAARQQVAADER 196

Query: 240 SQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRS 299
           ++G  EA+K+R  A  +    LA+  RQ + ++GEGDA+AA++ ADA+  DP FY F +S
Sbjct: 197 AKGTAEADKIRQDAIGQQQAILADGYRQAQTIKGEGDAKAAQIAADAYGSDPQFYQFYQS 256

Query: 300 LRAYENSFSGNQDVMVMSPDSDFFRYMKTPT 330
           ++AY+N+F    DV+V+ P ++FFR+M++ T
Sbjct: 257 MQAYKNTFKPG-DVIVVDPSNEFFRFMRSST 286