Pairwise Alignments

Query, 418 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 418 a.a., inner membrane protein YjeH (RefSeq) from Shewanella amazonensis SB2B

 Score =  246 bits (628), Expect = 9e-70
 Identities = 141/409 (34%), Positives = 227/409 (55%), Gaps = 10/409 (2%)

Query: 1   MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFA 60
           M  +K  +G  QG GL++T+LLGTGVF +P +    AG ++LWAW +L + + P+ +VF 
Sbjct: 1   MEHIKGTIGRWQGAGLMATTLLGTGVFILPQMTLAKAGTSALWAWALLTLAIIPVTLVFG 60

Query: 61  ILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSW 120
            L   +P A G A FV  AFG  L R  G +FL VIP+G PAA+ +   F  A+      
Sbjct: 61  RLASRFPHAAGPAFFVEKAFGRTLGRSIGLIFLLVIPMGAPAAILMTFQFVTALLPLAGV 120

Query: 121 QLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGN 180
           +LLLA+L  + L+W+   +G   SA  Q  +   IVA+++A++    ++   +  P   +
Sbjct: 121 ELLLAQLLVIGLLWFANLKGLQVSAKAQFALTLGIVAVVLALFMGLGVQHHAVELPDFES 180

Query: 181 IELTG-LFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVV 239
              TG +  A  + FW F+G+EA  HLA +F+ PE+D   A+M+G +L GL+Y GCT ++
Sbjct: 181 AWQTGPMMLAAGIAFWSFLGVEAMTHLAHDFREPEKDMIPAMMLGTVLVGLIYLGCTSLL 240

Query: 240 LHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQ 299
                +    +   ++  +   L G G   +  ++G  A  A++N+Y  S ARL+WS ++
Sbjct: 241 -----WLVPSSTGVAMMGVFDTLLGAGGAQVIGILGVSAGLATVNVYAGSAARLLWSFSR 295

Query: 300 HN-PDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLC 358
                 Y  RL+   +P  A  A+LG   +   ++   E +L+ LI ++NG+F++IY + 
Sbjct: 296 EGIMPRYFQRLNDHGVPVRAQTAILGSMALVLTLVFVFEQDLEQLIAWSNGVFVIIYAMS 355

Query: 359 MLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLP 407
           MLA  +LL    RL  ++G   CV L   +G +  YA+++   L L+LP
Sbjct: 356 MLAAWRLLGASSRLWILLGLGFCVALGVALGGRMFYAVLL---LMLVLP 401