Pairwise Alignments

Query, 191 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 205 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 41.2 bits (95), Expect = 1e-08
 Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 10/191 (5%)

Query: 2   QREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQID 61
           +R+ ++  A KL   Q +    +  + +        L   +  K+ ++   +RY  +   
Sbjct: 15  KRQQLVTTAFKLFYFQSVHGVGINQILQESAIAKKTLYHHFVSKDELVKAVVRYRDETFY 74

Query: 62  VWRRQLMLDETQTAEQKLLARYQALSECVKNNRYP------GCLFIAACTFYPDPGHPIH 115
            W  +  ++ +    + +   ++AL +   N R P      GC FI     + +P HP+H
Sbjct: 75  QWLSE-RVNASPAGREGIRGLFRALDDWF-NQRVPQLCEFRGCFFINVSAEFTEPSHPVH 132

Query: 116 QLADQQKSAAYDFTHELLTTLEVDD--PAMVAKQMELVLEGCLSRMLVNRSQADVDTAHR 173
           QL    K          ++ L + +     +   + L+ EG +    +         A  
Sbjct: 133 QLCALHKQRVASLIERQVSALGLPEAKTQYLVAAIGLLKEGAIVSAQLKGETQSALLALA 192

Query: 174 LAEDILRFARC 184
           + E +L  A C
Sbjct: 193 VVEQLLDAATC 203