Pairwise Alignments

Query, 222 a.a., DNA-binding response regulator in two-component regulatory system with BasS (NCBI) from Escherichia coli BW25113

Subject, 219 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  180 bits (456), Expect = 2e-50
 Identities = 101/216 (46%), Positives = 131/216 (60%)

Query: 1   MKILIVEDDTLLLQGLILAAQTEGYACDSVTTARMAEQSLEAGHYSLVVLDLGLPDEDGL 60
           M+IL+VEDD  L +G+  A + EGY  D +     A  +L    + L +LDLGLP  DGL
Sbjct: 1   MRILLVEDDRALGEGIRTALKPEGYTVDWLQDGASALHALSHESFELAILDLGLPRLDGL 60

Query: 61  HFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHN 120
             L R+R     +PVL+LTARD   D+IAGLD GADDYLVKPF + EL AR+RALLRR  
Sbjct: 61  EVLKRLRAAANPVPVLVLTARDATGDRIAGLDAGADDYLVKPFDVAELKARLRALLRRSF 120

Query: 121 NQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSRLMLKAGSPVHREILYNDIYN 180
           N+ E  L    + L+   +QV   G  + L  KE+ LL  L+ + G  + R+ L   +Y 
Sbjct: 121 NRPEPSLEYRGILLDPVNQQVSYQGTPINLPRKEFVLLHELLAQPGRVLTRDRLQQVLYG 180

Query: 181 WDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYML 216
           WD E  +N LEVHIH+LR K     IRTVRG GY++
Sbjct: 181 WDEEVESNALEVHIHHLRKKFFPELIRTVRGVGYLV 216