Pairwise Alignments

Query, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

Subject, 966 a.a., uvrABC system protein A from Phaeobacter inhibens DSM 17395

 Score = 1142 bits (2953), Expect = 0.0
 Identities = 580/958 (60%), Positives = 727/958 (75%), Gaps = 21/958 (2%)

Query: 1   MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           +  IEVRGAR HNLKNI++ IPRD+L+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY
Sbjct: 4   LKSIEVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFL +MEKPDVDHI GLSPAISIEQK+TS NPRSTVGT+TEI+DYLRLLFAR G P  
Sbjct: 64  ARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARAGTPYS 123

Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180
           P   +P+ AQ V  MVD +++  EG R  LLAPI+++RKGE+ K    L  QG+ R ++D
Sbjct: 124 PATGMPIEAQQVQDMVDRIMTLEEGTRGFLLAPIVRDRKGEYRKEFLELRKQGFQRVKVD 183

Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM--- 237
           GE  +L +PP L+ + +H I+VVVDR  VR+ +  RLA+S  TAL+L+ G A++      
Sbjct: 184 GEFYELDEPPTLDKKFRHDIDVVVDRLVVREGVETRLADSLRTALDLADGIAILETAPRA 243

Query: 238 ----DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293
               + P+ E + FS NFACP+ G+++ E+EPRLFSFN P GACP CDGLGV+ +FD   
Sbjct: 244 AEGEEAPEPERITFSENFACPVSGFTIPEIEPRLFSFNAPFGACPECDGLGVELFFDERL 303

Query: 294 VIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352
           V+ +  L +  GA+  W + ++ Y+ Q ++++A HY+F+    W  L   V +V L GSG
Sbjct: 304 VVPDQNLKIYDGALAPWRKGKSPYFLQTIEAIAKHYQFNKNTKWKDLPNKVQQVFLRGSG 363

Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412
            E I+F+Y ++ G        FEGV+ NMERRY+ET+S+ +REE  ++ +NR C  CEG 
Sbjct: 364 DEEIKFRY-DEGGRVYEVERVFEGVIPNMERRYRETDSNWIREEFERYQNNRSCGVCEGY 422

Query: 413 RLRREARHVYVENTP--------LPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKE 462
           RLR EA  V +  T         +  +  MSI  A+ +  ++  +L+ Q+ +IA  I+KE
Sbjct: 423 RLREEALAVKIGPTGGRPDQLLHVGQVVQMSIREALAWIEDVPNQLSPQKQEIARAIVKE 482

Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522
           I +RL FL NVGL YLTLSR+A TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQR
Sbjct: 483 IRERLGFLNNVGLEYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQR 542

Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582
           DN+RLL TL +LRD GNTVIVVEHDEDAIR AD+V DIGPGAGVHGG+VV+ G  E + A
Sbjct: 543 DNDRLLETLKNLRDQGNTVIVVEHDEDAIREADYVFDIGPGAGVHGGQVVSHGTPEMVAA 602

Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642
              S+TGQY+SG R+I VP  R   N + V K+  A GNNLK+VT   P+G F C++GVS
Sbjct: 603 DEGSITGQYLSGTREIAVPSVRRKGNGKSV-KVVKATGNNLKNVTAEFPLGKFLCVSGVS 661

Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702
           G GKSTL  +TLF  A  +LNGA    PAP   I+GLEH DKVIDIDQ PIGRTPRSNPA
Sbjct: 662 GGGKSTLTIETLFKTASMRLNGAR-QTPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPA 720

Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762
           TYTG FTP+RE FAG+PES+ RGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+YV 
Sbjct: 721 TYTGAFTPIREWFAGLPESKTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVE 780

Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822
           C+ CKG RYNRETLEI++KGK+I +VLDMT+E+A++FF AVP++  K+  LM VGL YI+
Sbjct: 781 CETCKGARYNRETLEIQFKGKSIADVLDMTVEDAQQFFQAVPSIRDKMDALMRVGLGYIK 840

Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882
           +GQ ATTLSGGEAQRVKL++EL+KR TG+TLYILDEPTTGLHF D+++LL+VLH+L +QG
Sbjct: 841 VGQQATTLSGGEAQRVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQG 900

Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           N++VVIEHNLDVIKTADWI+D+GPEGG GGGEI+ +GTPE VA  + SHT  +LK +L
Sbjct: 901 NSVVVIEHNLDVIKTADWIIDIGPEGGDGGGEIVAAGTPEDVAAAKGSHTGHYLKEIL 958