Pairwise Alignments

Query, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

Subject, 939 a.a., excinuclease ABC, A subunit from Dechlorosoma suillum PS

 Score = 1364 bits (3531), Expect = 0.0
 Identities = 668/940 (71%), Positives = 793/940 (84%), Gaps = 3/940 (0%)

Query: 1   MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MD+I++RGARTHNLKNI+L +PRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDEIKIRGARTHNLKNISLDLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFL LMEKPDVD IEGLSPAISIEQK+TSHNPRSTVGT+TEIHDYLRLL+AR G P C
Sbjct: 61  ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPYC 120

Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180
           P+H  PL AQTVSQMVD+VL+ PE  +LM+LAP++  RKGE       L +QG++R R+D
Sbjct: 121 PEHGEPLEAQTVSQMVDHVLALPEETKLMILAPVVANRKGEQLDLFTELRAQGFVRLRVD 180

Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240
           G + ++ + PKL   +KH I+VVVDR KVR+D+ QRLAESFETAL  + G A+  +M+  
Sbjct: 181 GTIYEIDNLPKLAKSQKHNIDVVVDRLKVREDMRQRLAESFETALRHADGRAIALEMESN 240

Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300
             +E LFSA FACPIC Y+++ELEPRLFSFNNP GACP CDGLGV Q+FDP RV+ +P+L
Sbjct: 241 --QEHLFSAKFACPICSYALQELEPRLFSFNNPMGACPKCDGLGVIQFFDPKRVVAHPDL 298

Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360
           SLA GAIRGWD+RN +YFQM+ SLA++Y F V+ P+  L+  V +V+LYGS K+ + F+Y
Sbjct: 299 SLAAGAIRGWDKRNQFYFQMIGSLAEYYGFSVDTPFSELTDEVKQVLLYGSDKDLVPFQY 358

Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420
           MN+RG   ++ H FEG++ N+ERRYKET+S AVREELAK+ISN  C +CEGTRLR+EARH
Sbjct: 359 MNERGKLVLKEHAFEGIIPNLERRYKETDSLAVREELAKYISNTTCPTCEGTRLRQEARH 418

Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480
           V V +  L  IS + +  A ++F  ++L G +A++AEKILKEI  RL+FL+NVGL+YL+L
Sbjct: 419 VKVGSKTLHEISHLPLAEARDYFETIQLTGHKAQVAEKILKEITSRLQFLINVGLDYLSL 478

Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540
            RSAETLSGGEAQRIRLASQIG+GL GVMYVLDEPSIGLHQRDN+RLL TL  LRD+GNT
Sbjct: 479 DRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLQTLRQLRDIGNT 538

Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600
           VIVVEHDEDAIR AD+V+DIGPGAGVHGG +VAEG  + +   P S+TG Y+SG++KIEV
Sbjct: 539 VIVVEHDEDAIRTADYVVDIGPGAGVHGGAIVAEGTPQQVTDNPASMTGDYLSGRKKIEV 598

Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660
           PKKR  A+PEK L++ GA+GNNLKDV+L LPVGL TCITGVSGSGKSTLINDTL+  A +
Sbjct: 599 PKKRRQADPEKKLQVIGAKGNNLKDVSLELPVGLMTCITGVSGSGKSTLINDTLYTAAAK 658

Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720
            L G+T AEPA + +I GL+HFDKVI++DQSPIGRTPRSNPATYTG+ TP+RELFAGVPE
Sbjct: 659 HLYGST-AEPAEHEEIIGLDHFDKVINVDQSPIGRTPRSNPATYTGLLTPIRELFAGVPE 717

Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780
           +R+RGY PGRFSFNV+GGRCEACQGDGVIKVEMHFLPDIYVPCD C GKRYNRETLE+ Y
Sbjct: 718 ARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCHGKRYNRETLEVHY 777

Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840
           KGK+I++VL MT+E+AREFFD VP +ARKLQTL+DVGL+YI LGQSATTLSGGEAQRVKL
Sbjct: 778 KGKSIYDVLQMTVEQAREFFDPVPVVARKLQTLVDVGLSYITLGQSATTLSGGEAQRVKL 837

Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900
           A ELSKR TG+TLYILDEPTTGLHFADI+ LL VLH+L D GNT+VVIEHNLDVIKTADW
Sbjct: 838 ALELSKRDTGRTLYILDEPTTGLHFADIEMLLKVLHRLADHGNTVVVIEHNLDVIKTADW 897

Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           +VDLGPEGG GGG I+ +G PE V +   SHT RFLKP+L
Sbjct: 898 LVDLGPEGGGGGGRIIAAGAPEAVVKVGESHTGRFLKPLL 937