Pairwise Alignments

Query, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

Subject, 968 a.a., excinuclease ABC subunit A from Caulobacter crescentus NA1000

 Score = 1172 bits (3033), Expect = 0.0
 Identities = 593/944 (62%), Positives = 742/944 (78%), Gaps = 9/944 (0%)

Query: 4   IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
           I VRGAR HNLK++++ IPR +L+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 8   IRVRGAREHNLKDVSVDIPRGELVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 67

Query: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123
           FL LM KPDVD IEGLSPAISIEQK+TS NPRSTVGT+TEIHDY+RLL+ARVG P  P  
Sbjct: 68  FLELMSKPDVDLIEGLSPAISIEQKTTSRNPRSTVGTVTEIHDYMRLLWARVGIPYSPAT 127

Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183
            +P+ +QT+SQMVD + + PEG RL LLAP++++RKGE+ K + +    G+ R +IDG+ 
Sbjct: 128 GLPIESQTISQMVDKITALPEGTRLYLLAPVVRDRKGEYKKEIADWQKAGFQRLKIDGQY 187

Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV--ADMDDPK 241
             + D P L+ + KH I+VVVDR   + D+ QRLA+S E AL L+ G AV   A +++ +
Sbjct: 188 YPIEDAPALDKKFKHDIDVVVDRVVTKPDMEQRLADSIEQALRLADGLAVAEFATLEEGE 247

Query: 242 AE--ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299
            E   +LFS  FACP+ G+++ E+EPRLFSFNNPAGACP CDGLG +  FD D VI + +
Sbjct: 248 TEPRRILFSERFACPVSGFTIAEIEPRLFSFNNPAGACPVCDGLGAKLAFDADLVIPDKD 307

Query: 300 LSLAGGAIRGWDRR-NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358
            +L GGA+  W +  +  Y Q L++LA HY F ++ PW  LS     VVL GS    I+F
Sbjct: 308 RTLHGGAVAPWAKGPSPLYTQTLQALARHYGFSMDEPWHKLSTEARDVVLNGSKGAKIKF 367

Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418
            Y ++     + + PFEGVL N+ERR++ET+SS VREEL +F S+ PC SC G RL+ EA
Sbjct: 368 VYDDNARKYEVEK-PFEGVLPNLERRWRETDSSWVREELGRFQSDTPCESCHGKRLKPEA 426

Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476
             V V    +  +S M+I  A ++F  L  KL+ ++ +IA +ILKEI DRL+FLV+VGL+
Sbjct: 427 LAVKVSGMDIAEVSMMAIRPARDWFAGLEGKLSDKQMEIARRILKEINDRLRFLVDVGLD 486

Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536
           YL +SR + TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN RLL +L  LRD
Sbjct: 487 YLNMSRGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNTRLLTSLQGLRD 546

Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596
           LGN+V+VVEHDE+AI  AD+VID+GP AGVHGGE+VA+G    IMA P+SLTGQY++G R
Sbjct: 547 LGNSVLVVEHDEEAILTADYVIDMGPAAGVHGGEIVAQGKPADIMANPKSLTGQYLTGAR 606

Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656
           +IEVP++R P + +K+L++ GA GNNLK VT  +PVG FTCITGVSG GKST   +TL+ 
Sbjct: 607 EIEVPEQRRPISKKKMLRVVGATGNNLKGVTAEIPVGTFTCITGVSGGGKSTFTIETLYK 666

Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716
            A R+LN A+ A PAP+  I+GLEHFDKVIDIDQSPIGRTPRSNPATYTG F P+R+ FA
Sbjct: 667 AAARRLNNASDA-PAPHERIEGLEHFDKVIDIDQSPIGRTPRSNPATYTGAFGPIRDWFA 725

Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776
           G+PES+ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+YV CD CKGKRYNRETL
Sbjct: 726 GLPESKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDICKGKRYNRETL 785

Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836
           ++ +KGKTI +VLDMT+EEA +FF AVP +  K++TL  VGL+YI++GQ ATTLSGGEAQ
Sbjct: 786 DVVFKGKTIADVLDMTVEEAADFFKAVPPIRDKMETLKRVGLSYIKVGQQATTLSGGEAQ 845

Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896
           RVKL++ELSKR TG+TLYILDEPTTGLHF D ++LL+VLH+L DQGNT+VVIEHNLDV+K
Sbjct: 846 RVKLSKELSKRATGRTLYILDEPTTGLHFEDTKKLLEVLHELADQGNTVVVIEHNLDVVK 905

Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           TADW++D GPEGG GGGEI+  G+P+ VA+ EAS T R+LK +L
Sbjct: 906 TADWLLDFGPEGGDGGGEIVAVGSPQDVAKVEASWTGRYLKELL 949