Pairwise Alignments

Query, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

Subject, 954 a.a., excinuclease ABC subunit UvrA from Ralstonia sp. UNC404CL21Col

 Score = 1294 bits (3349), Expect = 0.0
 Identities = 643/954 (67%), Positives = 773/954 (81%), Gaps = 17/954 (1%)

Query: 1   MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MD+I++RGARTHNLKNINL +PR++LIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDEIKIRGARTHNLKNINLDLPRNQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFL LMEKPDVD IEGLSPAISIEQK+TSHNPRSTVGT+TEIHDYLRLL+AR G P C
Sbjct: 61  ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPYC 120

Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI- 179
           PDH  PL AQ+VSQMVD VL+ P   +LM+LAP++  RKGEH    E + +QG++R RI 
Sbjct: 121 PDHGQPLEAQSVSQMVDAVLALPADTKLMILAPVVANRKGEHVDLFEAMQAQGFVRFRIR 180

Query: 180 ---------DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG 230
                    + +V ++ + PKL+   KH+IEVVVDR KV  +L QRLAESFETAL L+ G
Sbjct: 181 SGGGTAHEAEAKVYEVDNLPKLKKNDKHSIEVVVDRVKVNPELKQRLAESFETALRLADG 240

Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290
            A+  +MD  K  E  FS+ FACPIC YS++ELEPRLFSFNNP GACP CDGLG   +FD
Sbjct: 241 RAIALEMDTGK--EHGFSSKFACPICSYSLQELEPRLFSFNNPMGACPHCDGLGQITFFD 298

Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350
           P RV+  P LSLA GAI+GWDRRN +YFQML+SLA  Y  D++  +  L A + ++VL+G
Sbjct: 299 PKRVVAFPNLSLASGAIKGWDRRNQFYFQMLQSLAAFYDVDIDVAFEDLPAEIQQIVLHG 358

Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410
           SGK+ I F Y+N+RG T++R H FEG++ N+ERRYKET+S AVREELAK+ +N+PC  C 
Sbjct: 359 SGKQQIPFTYINERGKTTVREHAFEGIIPNLERRYKETDSIAVREELAKYQNNQPCPECH 418

Query: 411 GTRLRREARHVYVENTP----LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR 466
           GTRLRREAR V +        +  I+   +  A+ +F  L + G + +IA+KI+KEI  R
Sbjct: 419 GTRLRREARFVKIGEADQARGIYEINGWPLRDALTYFLTLNMHGAKREIADKIVKEITAR 478

Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526
           L FL NVGL+YL+L RSA+TLSGGEAQRIRLASQIG+GL GVMYVLDEPSIGLHQRDN+R
Sbjct: 479 LNFLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDR 538

Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586
           L+GTL HLRDLGN+V+VVEHDED IRA+D+V+DIGPGAGVHGG+++AEG  + +   P S
Sbjct: 539 LIGTLKHLRDLGNSVLVVEHDEDMIRASDYVVDIGPGAGVHGGQIIAEGTPKQVEQSPAS 598

Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646
           LTG Y+SGKR+IEVPK+R   + E+ L++  A GNNLK+V+  +P+GL TCITGVSGSGK
Sbjct: 599 LTGDYLSGKRRIEVPKQRTAPDEERWLRIINASGNNLKNVSADIPIGLLTCITGVSGSGK 658

Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706
           STLINDTL+    R L G+T  EPA +  I GLEHFDKVI++DQSPIGRTPRSNPATYTG
Sbjct: 659 STLINDTLYHAVARHLYGST-PEPAAHDRIDGLEHFDKVINVDQSPIGRTPRSNPATYTG 717

Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766
           +FTP+RELFAGVP ++ RGY PGRFSFNV+GGRCEACQGDGV+KVEMHFLPD+YVPCD C
Sbjct: 718 LFTPIRELFAGVPSAKERGYDPGRFSFNVKGGRCEACQGDGVLKVEMHFLPDVYVPCDVC 777

Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826
            GKRYNRETLE+ YKGK I EVL+MT+E+A EFF  VP + RKLQTL+DVGL YIRLGQS
Sbjct: 778 HGKRYNRETLEVLYKGKNITEVLEMTVEQAHEFFAPVPVVRRKLQTLLDVGLGYIRLGQS 837

Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886
           ATTLSGGEAQRVKL+ ELSKR TG+TLYILDEPTTGLHF DI+ LL V++KLRD GNTIV
Sbjct: 838 ATTLSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLKVIYKLRDHGNTIV 897

Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           +IEHNLDVIKTADW++DLGPEGG+GGG+I+  GTPE VA+ +AS T ++L P+L
Sbjct: 898 IIEHNLDVIKTADWLLDLGPEGGAGGGQIIAKGTPEDVAKSKASFTGKYLAPLL 951