Pairwise Alignments

Query, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

Subject, 950 a.a., excinuclease ABC subunit A (RefSeq) from Shewanella sp. ANA-3

 Score = 1547 bits (4005), Expect = 0.0
 Identities = 756/940 (80%), Positives = 842/940 (89%)

Query: 1   MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIE+RGARTHNLKNINL IPRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLLFARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC 120

Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180
           P H  PLAAQTVSQMVD VL  PE  RLMLLAP++  RKGEH K LE L++QGYIRARID
Sbjct: 121 PTHGQPLAAQTVSQMVDKVLEMPEDSRLMLLAPVVNGRKGEHVKLLEGLSAQGYIRARID 180

Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240
           GEVCDL+DPP L+L  KHTIEVVVDRFKVR D+ QRLAESFETALELSGG AVVA MD+ 
Sbjct: 181 GEVCDLTDPPALDLHVKHTIEVVVDRFKVRSDIQQRLAESFETALELSGGIAVVASMDEG 240

Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300
             EEL+FSANFACP CGYSM ELEPR+FSFNNPAGACPTCDGLGVQQ+FDPDRVI NPEL
Sbjct: 241 TTEELIFSANFACPHCGYSMAELEPRIFSFNNPAGACPTCDGLGVQQFFDPDRVITNPEL 300

Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360
           SLAGGAIRGWDRRNFYYFQML SLADHYKFDVE P+  LS  V K+VLYGSGK++I FKY
Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLSSLADHYKFDVEVPFEQLSDKVRKIVLYGSGKDSIAFKY 360

Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420
           +NDRGD  +R HPFEG+L+NM+RRY+ETES+AVREELAKFI+ + C SC G+RLR EAR+
Sbjct: 361 INDRGDVVVRNHPFEGILNNMDRRYRETESNAVREELAKFINTQACQSCGGSRLREEARN 420

Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480
           V++ +  LP ++  SIG A+E+F+ L+ +GQ+A+IAEK+LKE+ DRL FLVNVGLNYL+L
Sbjct: 421 VFIGDLNLPKLTVWSIGEALEYFDKLEFSGQKAQIAEKVLKEVRDRLGFLVNVGLNYLSL 480

Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540
           SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLIHLRDLGNT
Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHLRDLGNT 540

Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600
           VIVVEHDEDAIR ADH+IDIGPGAGVHGGEV+ +GP+E I+A  ES+TGQY+SGKR I +
Sbjct: 541 VIVVEHDEDAIRIADHIIDIGPGAGVHGGEVICDGPIEKIVACDESVTGQYISGKRNIHI 600

Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660
              R P +P++V++L GARGNNL++V LT+PVGLFTC+TGVSGSGKSTLINDT F IA +
Sbjct: 601 STPRTPYDPKQVIELYGARGNNLRNVDLTVPVGLFTCVTGVSGSGKSTLINDTFFRIAHK 660

Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720
           QLNGAT+ EPAPY  I G+E  DKV+DIDQSPIGRTPRSNPATYTG+FTP+RE+FA   E
Sbjct: 661 QLNGATVDEPAPYDRIVGMEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIREIFAATQE 720

Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780
           SR RGY  GRFSFNV+GGRCEACQGDG+IKVEMHFLPD+YVPCD CKGKRYNRETLE++Y
Sbjct: 721 SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDACKGKRYNRETLEVRY 780

Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840
           KGK IHEVL MT+E+AREFFDAVPA+ARKLQTLMDVGL+Y+RLGQSATTLSGGEAQRVKL
Sbjct: 781 KGKNIHEVLQMTVEDAREFFDAVPAIARKLQTLMDVGLSYVRLGQSATTLSGGEAQRVKL 840

Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900
           A+ELSKR TG+TLYILDEPTTGLHFADIQ LLDVLH+L+  GNTIVVIEHNLDVIKTADW
Sbjct: 841 AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW 900

Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           I+DLGPEGG GGG IL +GTPE VA+   SHTARFLKP+L
Sbjct: 901 IIDLGPEGGGGGGTILATGTPEDVAQHPTSHTARFLKPLL 940