Pairwise Alignments

Query, 158 a.a., stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) from Escherichia coli BW25113

Subject, 159 a.a., anti-RNA polymerase sigma 70 factor from Marinobacter adhaerens HP15

 Score = 89.4 bits (220), Expect = 3e-23
 Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 10/150 (6%)

Query: 1   MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDF--- 57
           ML    N  ER  G ++L+DRWL  R+ LLV Y +L G     ES     E   + F   
Sbjct: 1   MLENCRNARERWGGVSELIDRWLKERQELLVHYCDLSG-----ESDFSQTEALREKFVRL 55

Query: 58  CQSLVDYLSAGHFSIYERILHKLE--GNGQLARAAKIWPQLEANTQQIMDYYDSSLETAI 115
           C+ LVDY+S GHF IYE+++ +     +G L  AAK++P++E  T+  +++ D      +
Sbjct: 56  CEVLVDYVSTGHFEIYEQLVREAREFNDGGLELAAKVYPRIEQTTEVALNFNDRLDGRDL 115

Query: 116 DHDNYLEFQQVLSDIGEALEARFVLEDKLI 145
             ++  E    LS +GE LE RF +ED LI
Sbjct: 116 SEEDVKELFGELSKLGETLETRFEMEDFLI 145