Pairwise Alignments

Query, 614 a.a., vitamin B12/cobalamin outer membrane transporter (NCBI) from Escherichia coli BW25113

Subject, 617 a.a., TonB-dependent vitamin B12 receptor from Pseudomonas stutzeri RCH2

 Score =  262 bits (669), Expect = 4e-74
 Identities = 200/607 (32%), Positives = 292/607 (48%), Gaps = 51/607 (8%)

Query: 29  VVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRRLPGVDITQNGGSGQLSSIFI 88
           VVTA R  Q     LA  TV+ R+ I+R Q++S+ ++L+++PGV +  NGG G+ +S+F+
Sbjct: 36  VVTATRTAQTAQQSLAAVTVIDRERIERSQASSLPELLKQVPGVSLANNGGPGKSTSLFM 95

Query: 89  RGTNASHVLVLIDGVRLNLAGVSGSADLSQFPIALVQRVEYIRGPRSAVYGSDAIGGVVN 148
           RGT + HVLV+IDG+++      G A L   P+ L++R+E +RGPRS++YGS+AIGGV+ 
Sbjct: 96  RGTESDHVLVMIDGIKIGSVS-GGGAALQDLPLELIERIEVVRGPRSSLYGSEAIGGVIQ 154

Query: 149 IITTRDE-PGTE--ISAGWGSNSYQNYDVSTQQQLGDKTRVTLLG-DYAHTHGYDVVAYG 204
           I T + +  G +   SAG+G  ++  Y  S     GD      LG   + T G +V +  
Sbjct: 155 IFTRKGQGQGVKPFFSAGYG--THDTYTGSAGVSGGDGRGWYSLGVSGSDTDGINVKSAD 212

Query: 205 NTGTQAQTDNDGFLSKTLYGA--------LEHNFTDAWSGFVRGYGYDNR---TNYDAYY 253
            +G +   D    LS TL           L+ N   A S     Y   NR   + + A  
Sbjct: 213 TSGYERDADGYRNLSATLSAGYRFDNGLELDANLLQAKSH--NDYDSVNRARTSGFGANA 270

Query: 254 SPGSPLLDTRKLYS--QSWDAGLRYNGELIKSQLITSYSHSKDYNYDPHYGRYDSSATLD 311
              S +  TR  +S  + W         L+  Q   S   S  Y     Y R+DS     
Sbjct: 271 DGESRVFGTRARFSPLEPW---------LVTLQAGRSEDKSDAYQDGQFYSRFDS----- 316

Query: 312 EMKQYTVQWANNVIVGHG-SIGAGVDWQKQTTTPGTGYVEDGYDQRNTGIYLTGLQQVGD 370
             ++ T+ W N++ +  G ++  G D Q+      T Y ED  D  N G +   L +VG 
Sbjct: 317 --RRDTLSWQNDIELAAGHTLILGADHQRDEVNGTTVYAEDSRD--NDGYFAQYLGEVGR 372

Query: 371 FTFEGAARSDDNSQFGRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQLY-GFYGNPN 429
             ++ + R DDN QFG+H T     G+   +  R   SYGT++KAP   +LY   YGNP 
Sbjct: 373 HDWQLSLRRDDNEQFGQHDTGNIGYGYALTDWLRGTISYGTAFKAPTFNELYFPDYGNPE 432

Query: 430 LDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYYNEGKARIKGVEATAN 489
           LD E S+  E    G     +W ++ YR  V DLI YD       N  +ARI+GVE    
Sbjct: 433 LDAETSESLEVGLAGQHGWGHWAVNAYRTVVDDLIAYDASISAPANVQEARIRGVELVLG 492

Query: 490 FDTGPLTHTVSYDYVDARN----AITDTPLLRRAKQQVKYQLDWQLYDFDWGITYQYLGT 545
                     +Y  ++  N    A     L RRAKQ     LD +L  F  G +    G 
Sbjct: 493 SQLLGWDWNANYSLLEPENRSAGANRGNELARRAKQLFNLDLDRRLGAFSVGASLHAEGQ 552

Query: 546 RYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQTAGRE 605
           RYD D ++    T ++ G +  DL   Y +T    ++ ++ANL D DYET  GY   G+ 
Sbjct: 553 RYD-DLAN----TRELSGYATLDLRGEYRITPEWRLQARVANLLDADYETAEGYNQPGQA 607

Query: 606 YTLSGSY 612
             L+  Y
Sbjct: 608 AYLTVRY 614