Pairwise Alignments

Query, 614 a.a., vitamin B12/cobalamin outer membrane transporter (NCBI) from Escherichia coli BW25113

Subject, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (341), Expect = 4e-36
 Identities = 165/675 (24%), Positives = 260/675 (38%), Gaps = 121/675 (17%)

Query: 17  SAWAQDTSP--DTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRRLPGVDI 74
           SA+AQD +   +T+VVTA  + Q      A  +V++R+D++      V D L+ +PGV +
Sbjct: 22  SAFAQDATKTDETMVVTAAGYAQVIQNAPASISVISREDLESRYYRDVTDALKSVPGVTV 81

Query: 75  TQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQF------PIALVQRVE 128
           T   G G  + I IRG  +++ L+L+DG R        ++D          P+  ++R+E
Sbjct: 82  T---GGGDTTDISIRGMGSNYTLILVDGKRQTSRQTRPNSDGPGIEQGWLPPLQAIERIE 138

Query: 129 YIRGPRSAVYGSDAIGGVVNIITTRDEPGTEISAGWGSNSYQNYDVSTQQQLGDKTRVTL 188
            IRGP S +YGSDAIGGV+NIIT +D+        W  N   +  V   +  GD+     
Sbjct: 139 VIRGPMSTLYGSDAIGGVINIITRKDQ------QQWSGNVQLSTVVQENRASGDEQSANF 192

Query: 189 LGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTD-AWSGFVRGYGYDNRT 247
                 +    +  YG T    Q D D          +EH + D +         Y    
Sbjct: 193 FVTGPLSDALSLQVYGQT---TQRDED---------EIEHGYGDKSLRSLTSKLNYQLNP 240

Query: 248 NYDAYYSPGSPLLDTRKLYSQS-WDAGLRYNGELIKSQLITSY---SHS---KDYNYDPH 300
           ++      G    D      +S   +G R       +Q   ++   SH    +D      
Sbjct: 241 DHQLQLEAGVSAQDRENNVGKSAQSSGCRGTCSNTDNQYRRNHVAVSHQGDWQDVGQSDT 300

Query: 301 YGRYDSSATLD-EMKQYTVQWANNVI--VGHGSIGAGVDWQKQ----------------T 341
           Y +Y+ +     EM      + + ++  +G   +  GV+ + +                +
Sbjct: 301 YLQYEENTNKSREMSIDNTVFKSTLVAPIGEHMLSFGVEGKHESLEDKTSNKISSRTHIS 360

Query: 342 TTPGTGYVEDGYDQRNTGIYLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIE 401
            T   G++ED +           L +    TF G  R D +  +G H + +    W    
Sbjct: 361 NTQWAGFIEDEW----------ALAEQFRLTFGG--RLDHDKNYGSHFSPRVYGVWNLDP 408

Query: 402 GYRFIASYGTSYKAPNL-------GQLYG---FYGNPNLDPEKSKQWEGAFEGLT-AGVN 450
            +       T ++AP L       GQ+ G    YGNP+L PE S   E +    T +G+ 
Sbjct: 409 LWTVKGGVSTGFRAPQLREVTPDWGQVSGGGNIYGNPDLKPETSINKELSLMYSTGSGLA 468

Query: 451 WRISGYRNDVSDLI---------------DYDDHTLKYYNEGKARIKGVEATANFDTGPL 495
             ++ + ND  D I                +        N  +A   G EAT +    P+
Sbjct: 469 ASLTAFHNDFKDKITRVACPANICTAGPNQWGAAPTYRVNIDEAETYGAEATLSL---PI 525

Query: 496 THTV----SYDYVDARNA---ITDTPLLRRAKQQVKYQLDWQLYD--FDW------GITY 540
           T +V    SY Y  +          PLL+  K      L WQ  D    W      G   
Sbjct: 526 TESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSWQTTDRLNSWANLNYRGKEM 585

Query: 541 QYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYE-TVYGY 599
           Q  G   + D+ +  Y  +        D  V Y +T   T++  + NLFD++     YGY
Sbjct: 586 QPEGGASNDDFIAPSYTFI--------DTGVTYALTDTATIKAAVYNLFDQEVNYAEYGY 637

Query: 600 QTAGREYTLSGSYTF 614
              GR Y L     F
Sbjct: 638 VEDGRRYWLGLDIAF 652