Pairwise Alignments

Query, 614 a.a., vitamin B12/cobalamin outer membrane transporter (NCBI) from Escherichia coli BW25113

Subject, 649 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score =  175 bits (444), Expect = 5e-48
 Identities = 173/622 (27%), Positives = 280/622 (45%), Gaps = 62/622 (9%)

Query: 5   ASLLTACSVTAF-SAWAQDTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVN 63
           A L  ACS+    SA A DT  + +VVTA+  +Q  S+  A  +V+  ++I       + 
Sbjct: 20  ALLALACSLQPLLSAQADDTELEHIVVTASAKDQQLSSAPASISVIDAEEIKLLPVKDLG 79

Query: 64  DVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGV---SGSADLSQFP 120
           DVLR   GV++  +G +G+ +S+++RG + ++VL+L++G R++ +      G+ D++  P
Sbjct: 80  DVLRGSVGVNVV-SGNAGR-NSLYVRGMDETYVLMLVNGKRVSSSNGLWRGGNFDITAIP 137

Query: 121 IALVQRVEYIRGPRSAVYGSDAIGGVVNIIT---------TRDEPGTEISAGWGSNSYQN 171
           I  + RVE +RGP SA+YGSDA+GGV+N+IT         T D   +++  G G +  Q 
Sbjct: 138 IDAISRVEIVRGPMSALYGSDAVGGVINVITKAPTEDWQLTLDAEYSQMQEGDGGDR-QR 196

Query: 172 YDVSTQQQLGDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFT 231
           Y+V T  +L D   + L  + A    + +     T    +       +K LY AL     
Sbjct: 197 YNVFTSGKLTDSLGLMLTAESAEQDLWQLPEITPTFDTIEERK----TKKLYSALTWQLA 252

Query: 232 DAWSGFVRGYGYDNRTNYDAYYSPGSPLLD--TRKLYSQSWDAGLRYNGELIKSQLITS- 288
           D  +     Y YD        Y+  S       R  +  +  A  ++    +++ L  S 
Sbjct: 253 DNQT-LDFDYQYDKDKVPLTTYAEKSKREQQIERNTFGLTHKADWQWGQTQLEANLEDSK 311

Query: 289 -YSHSKDYNYDPHYGRY-DSSATLDEMKQYTVQWANNVIVGHGSIGAGV-DWQKQTTTPG 345
            Y ++  Y+  P  GR+ D   T  +   +   W  +  +G       V D  +  TT G
Sbjct: 312 LYDYNSRYSLQPPLGRHIDEKNTSFKATSFFSLWQQDFTLGGEYHKTEVEDPVQYPTTKG 371

Query: 346 TGYVEDGYDQRNTGIYLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIEGYRF 405
                D  DQ +       +  + D+T    AR +DN ++G + + +    +   +   F
Sbjct: 372 -----DSVDQYSL-FAQDEIDFLDDWTLTLGARYEDNEKYGNNLSPRAYIVYRATDKLTF 425

Query: 406 IASYGTSYKAPNL------------GQLYGFYGNPNLDPEKSKQWEGAFEGLTAGVNWRI 453
               GT+++AP L            G      GNP+LDPE S  +E  F  L +   W I
Sbjct: 426 KGGVGTAFRAPALFESSPTFASVSCGGACSVVGNPDLDPETSVNYE--FSVLMSDNTWDI 483

Query: 454 S--GYRNDVSDLI-----DYDDHTLKYYNEGKARIKGVEATANFD-TGPLTHTVSYDYVD 505
           S   Y N V DLI     D    +  YYNE +  ++G+E T   D T  L+   +Y Y+D
Sbjct: 484 SATAYHNKVKDLITVSTWDRVSPSRTYYNESEVTLQGIELTGRIDLTEDLSLKGNYSYLD 543

Query: 506 ARNAITDTPLLRRAKQQVKYQLDWQLYDFDWGITYQYLGTRYDKDYSSYPYQTVKMGGVS 565
              +   + L  R  Q    QLDW + D DW +   Y+   Y  DY       +K  G S
Sbjct: 544 TEKS-DGSELNGRPDQTANLQLDWHMTD-DWQL---YVSGNYFGDY--LDSSAIKRSGYS 596

Query: 566 LWDLAVAYPVTSHLTVRGKIAN 587
            +D   +Y +T ++ +R  + N
Sbjct: 597 RFDFGTSYRLTENIKLRAGMTN 618