Pairwise Alignments

Query, 732 a.a., primosome assembly protein PriA (NCBI) from Escherichia coli BW25113

Subject, 735 a.a., primosomal protein N' (RefSeq) from Shewanella amazonensis SB2B

 Score =  713 bits (1841), Expect = 0.0
 Identities = 369/727 (50%), Positives = 490/727 (67%), Gaps = 9/727 (1%)

Query: 6   VALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63
           VALPVP+ R++ Y LP   +     G RV+VPFGKQQ  IG++ +  D+ ELP  ++K +
Sbjct: 11  VALPVPMRRSYSYRLPAQPSTSPCPGKRVKVPFGKQQ-LIGLITATKDSCELPDAQIKEI 69

Query: 64  VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123
           +E++D EP  +  +++L LWAA YY    G +L  ALP+ LR+G  AA     +   T++
Sbjct: 70  IEIIDDEPALSEPLYKLTLWAARYYFCSQGQMLTQALPVALRKGADAAPKSRTWLKLTDK 129

Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183
            +   + +LKR+P QQ+    L Q  +  D+   +E + AAL+ L  K          + 
Sbjct: 130 AREAGITTLKRAPAQQKLAEMLWQHPLSLDEFNAMELSKAALKGLEDKDWVQREQVPVDI 189

Query: 184 S-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242
           +  WRT   +     +LN EQA AV AI+ AA+ ++  LL G+TGSGKTEVYLSVLE +L
Sbjct: 190 NLGWRTALELGETPHKLNKEQAVAVAAIN-AAEGYACALLEGITGSGKTEVYLSVLEKIL 248

Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302
           ++GKQAL++VPEIGLTPQTI RFR RF   V V+HS L D++RL AW   ++GEAAI+IG
Sbjct: 249 SEGKQALILVPEIGLTPQTIDRFRRRFKVEVAVIHSNLTDNQRLDAWRAGRSGEAAIIIG 308

Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362
           TRSALFTP    G+I++DEEHDSS+KQQEG  YHARDLAV R H E IP++LGSATP+LE
Sbjct: 309 TRSALFTPMAFPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLENIPVVLGSATPSLE 368

Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422
           +L N    +YR L L  RAGNA+   Q ++D++ Q ++AG++ AL+  MR HL A NQV+
Sbjct: 369 SLQNALSGRYRHLHLGERAGNAKKVRQGIIDIRNQPLKAGMSAALLNEMRLHLDAGNQVL 428

Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482
           LFLNRRGFAPALLCH+CG + EC RCD ++T+HQ    +RCHHC +Q  +PRQC +CGST
Sbjct: 429 LFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQKLGEIRCHHCGNQYAIPRQCHNCGST 488

Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542
            L+  G+GTEQLEQ L   FP  P+ RIDRDTT  KG+LE  L  +HRG  +IL+GTQML
Sbjct: 489 MLMGQGIGTEQLEQVLKEEFPKYPVVRIDRDTTRLKGSLENHLQAIHRGDYKILVGTQML 548

Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602
           AKGHHFPDVTLV LLDVDGALFSADFR+ ERF QLYTQVAGRAGRA K G V+LQTH  +
Sbjct: 549 AKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRAAKPGTVLLQTHQSD 608

Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662
           +P+L+ L++KGY  FA   L+ER+   LPP    V+ RAE H  + A  FL  +  ++  
Sbjct: 609 NPILRELMHKGYGDFARGQLSERKQAALPPAWHMVLARAEAHRAEDAEAFLAAIAAML-- 666

Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722
               D    V+GP+PA   ++ G+ R Q++ Q   R  LQ  +   L  I+ +P++++ +
Sbjct: 667 --PRDRGFEVIGPLPAPMDRKAGKHRRQLMFQAEQRQGLQQALEAILPAIDLLPEAKRCR 724

Query: 723 WVLDVDP 729
           W LD DP
Sbjct: 725 WSLDRDP 731