Pairwise Alignments

Query, 732 a.a., primosome assembly protein PriA (NCBI) from Escherichia coli BW25113

Subject, 811 a.a., Primosomal protein n (NCBI) from Rhodospirillum rubrum S1H

 Score =  400 bits (1028), Expect = e-115
 Identities = 284/800 (35%), Positives = 388/800 (48%), Gaps = 85/800 (10%)

Query: 2   PVAHVALPVPLPRTFDYLLPEGMTVKA-GCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60
           PV  V LP+PL   +DY +P GM   A G  VRVP G+++E IG+V     A E P   L
Sbjct: 23  PVVAVLLPLPLAGAYDYKVPAGMARPAVGTLVRVPLGRREE-IGVVWGAG-AGETPPERL 80

Query: 61  KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL---------PILLRQGRPAA 111
           K ++   +  P+    +   + W A Y   P G VL  AL         P  L   RP+A
Sbjct: 81  KPLIGFPECPPL-PAPLRAFIDWVAAYTVQPPGAVLRMALSVPAALEAPPPALGWRRPSA 139

Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK----IWRDQVATLEFNDAALQA 167
                   A  QG        + SP +Q+ LA L           D         A + A
Sbjct: 140 GQRAAGQRAEGQGPLP--GGARLSPGRQRVLAVLDDHPGLPFAGADLAREAAVGPAVVAA 197

Query: 168 LRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSAWLLAGVT 226
           + K GL +  + + E+S    +    G  L  + +Q  A   + +A D  FS  LL GVT
Sbjct: 198 MAKAGLLEAVTRSNEWSPQAPDADRPGPLL--SADQQAAADGLRTALDQGFSGLLLEGVT 255

Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286
           GSGKTEVY   +   L +G+QALV++PEI L  Q   RF +RF A     HS +  + R 
Sbjct: 256 GSGKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQWHSQMGAAARR 315

Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH 346
            AW     G A +V+G RSALF P+ +LG+I++DEEHDS++KQ+EG  Y+ARD+AV RA 
Sbjct: 316 RAWRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVPYNARDMAVVRAR 375

Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK----------- 395
               P +L SATP+LET+ N +Q +YR L L RR G A      +LDL+           
Sbjct: 376 LGGFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITLLDLRRAPPQKWLPTD 435

Query: 396 --GQKVQAGLA------------------------------------------PALITRM 411
             G     GLA                                          P LIT +
Sbjct: 436 FAGPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPARLGWLSPPLITAV 495

Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471
            + L A  QV+LFLNRRG+AP  LC  CG   +CPRC  +   H+    LRCHHC  Q+P
Sbjct: 496 EETLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDGRLRCHHCGYQQP 555

Query: 472 VPRQCPSCG-STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530
           +P  CP+CG +  L P G G E+L +  A  FP   +     DT +           +  
Sbjct: 556 IPETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPKEAAALATRIAN 615

Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590
               ++IGTQ++AKGHHFP +TLV ++D D  L   D R++ER  QL  QVAGRAGRA +
Sbjct: 616 HDIDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTHQLLHQVAGRAGRAER 675

Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650
            G V++QT  P HP+++ L       F E   AER+ + +PP+   V +     ++    
Sbjct: 676 PGRVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGRLVALVISGEDSARVQ 735

Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710
                L       P  D    VLGPVPA      GR R ++LL+    V++Q ++   L+
Sbjct: 736 AVAAALGRAAPMGPGLD----VLGPVPAPLAMLRGRHRHRLLLKAARGVKVQPVVRHWLS 791

Query: 711 LINTIPDSRKVKWVLDVDPI 730
           L++  P    VK  +DVDPI
Sbjct: 792 LVSIPPG---VKVQVDVDPI 808