Pairwise Alignments

Query, 732 a.a., primosome assembly protein PriA (NCBI) from Escherichia coli BW25113

Subject, 731 a.a., primosomal protein N' (RefSeq) from Shewanella loihica PV-4

 Score =  708 bits (1827), Expect = 0.0
 Identities = 370/727 (50%), Positives = 493/727 (67%), Gaps = 9/727 (1%)

Query: 6   VALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63
           VALPVP+ + F Y + E    KA  G RVRVPFG+QQ  IG+V  +S + +L  N++K+V
Sbjct: 7   VALPVPMRQAFSYRVKEADLDKAQVGVRVRVPFGRQQ-LIGLVTGLSQSCDLAPNQIKSV 65

Query: 64  VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123
           +  LD E V   S+++L  WAA YY   +G +L  ALP+ LR+G       +  W  T  
Sbjct: 66  ITFLDHEGVLPPSLYKLTQWAARYYFCSLGQMLSQALPVALRKGAEVEAQQLQVWRVTAA 125

Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183
           GQ  D++ LKR+P Q++ L AL + ++ +D++  LE +  AL+AL ++G  +      E 
Sbjct: 126 GQEADIDLLKRAPAQRKLLLALLETELSQDELNALEQSKTALKALVERGWIECIERRIES 185

Query: 184 S-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242
           +  WR    +     +LN EQA AV  ++     +   LL G+TGSGKTEVYL++LE VL
Sbjct: 186 NLSWRDGLELDETPHQLNPEQAIAVAMLNQQQG-YHCTLLEGITGSGKTEVYLALLETVL 244

Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302
            QGKQAL++VPEIGLTPQTI+RF+ RF   V V+HSGL D++RLSAW  A++GEAAI+IG
Sbjct: 245 KQGKQALILVPEIGLTPQTISRFKRRFKVQVAVIHSGLTDNQRLSAWRLARSGEAAIIIG 304

Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362
           TRSALFTP +  G+I++DEEHD+S+KQQEG  YHARDLAV R H E IP++LGSATP+LE
Sbjct: 305 TRSALFTPMRYPGIIILDEEHDASFKQQEGIGYHARDLAVMRGHLESIPVLLGSATPSLE 364

Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422
           TL N    +Y+ L L  RAG A    Q ++D++ Q ++ GL+  L+  MR HL A NQV+
Sbjct: 365 TLQNALSGRYQHLSLGSRAGAAEKVRQGIIDIRNQPLKNGLSHGLLNEMRIHLDAGNQVL 424

Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482
           LFLNRRGFAPALLCH+CG + EC RCD ++T+HQ+   +RCHHC +Q  +PRQC  CGST
Sbjct: 425 LFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQYAIPRQCHQCGST 484

Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542
            L+  G+GTEQL   LA  FP  P+ RIDRDTTSRKGALE  L  +H+G  +IL+GTQML
Sbjct: 485 MLMGQGVGTEQLADALAKEFPNYPVVRIDRDTTSRKGALETHLNAIHKGEYKILVGTQML 544

Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602
           AKGHHFPDVTLV LLDVDGALFSADFR+ ERF QLYTQV+GRAGRA K G V+LQTH  +
Sbjct: 545 AKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLLQTHQCD 604

Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662
           +P+L+ L++KGY  FA   L ER+   LPP    +++RAE H  + A  FL Q+  L+  
Sbjct: 605 NPILRELMHKGYGEFARGQLEERKQALLPPAWHMLLLRAEAHKAEDADAFLAQVAQLLPQ 664

Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722
               DE+  ++GP+PA   ++ G++R Q++ Q  +R  LQ      L  I  +P +++ +
Sbjct: 665 ----DEQCEIIGPMPAPMDRKAGKFRRQLMFQTKTRGLLQQAFEQALPQIEALPLAKRCR 720

Query: 723 WVLDVDP 729
           W LD DP
Sbjct: 721 WSLDRDP 727