Pairwise Alignments

Query, 483 a.a., PTS system, fructose-like enzyme IIBC component (VIMSS) from Escherichia coli BW25113

Subject, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (369), Expect = 2e-39
 Identities = 98/304 (32%), Positives = 158/304 (51%), Gaps = 21/304 (6%)

Query: 128 VMSHLMAGVSAALPFVIGGGILVALANMLVQFG-LPYTDMSKGAPSFTWVVESIGYLGFT 186
           V  HL+ G S  +PF++ GG+L++L+ M+   G +P   +          +  +G  G T
Sbjct: 178 VKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLAD-------IAQMGIAGLT 230

Query: 187 FMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFW 246
               ++G YIA S+ADKP  AP  +  ++A +      Q   GF+GA+++G   G+ V  
Sbjct: 231 LFTVVLGGYIAYSMADKPGLAPGMIGTWIAIN------QYQTGFIGAIIVGFFAGFVVRQ 284

Query: 247 FRKVRLGKALQPLLGSMLIPFV-TLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKF 305
            +++ L  ++  L    + P V T +  G + + +  P+ S ++  L  FL ++  S K 
Sbjct: 285 LKRIALPDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLW-LNQFLASMADSGKV 343

Query: 306 AAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDW-YAIVGVVALMPPVAAGLATFIA 364
               ++GAM AFDMGGPINK A    F+  + +   W    VG+    PP+   LAT ++
Sbjct: 344 VLGAVLGAMTAFDMGGPINKVATL--FAQTQVNTQPWLMGGVGIAICTPPLGMALATLLS 401

Query: 365 PKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITG-VLVIAFGIK 423
           P  F R E+EA  +A ++G    +E AIP+A A P  ++ A  +AGGI G V+   F + 
Sbjct: 402 PSKFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPA-IIAGGIVGNVIGFLFQVL 460

Query: 424 RLAP 427
             AP
Sbjct: 461 NHAP 464



 Score = 68.9 bits (167), Expect = 5e-16
 Identities = 35/94 (37%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 2   ESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAAD 61
           E    I+A+T+CP+G+AHT++ A++LE+ A   G  IKVETQG++G+ NR++++++  A 
Sbjct: 521 EGQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAK 580

Query: 62  YVILATGRGLSGDDRARFAGKKVYEIAISQALKN 95
            VI A    ++  +  RF   KV ++    A+ N
Sbjct: 581 LVIFA--HDVAIKEPERFKHIKVIDVTTKDAILN 612